Sam_g16410


Description : not classified & original description: none


Gene families : OG0001678 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001678_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g16410
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00039p00234040 evm_27.TU.AmTr_v1... ACT domain-containing protein DS12, chloroplastic... 0.02 OrthoFinder output from all 47 species
AT1G16880 No alias uridylyltransferase-related 0.04 OrthoFinder output from all 47 species
Adi_g007402 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g040829 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g04149 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g09197 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g09514 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g15810 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G055000.1 Ceric.01G055000 not classified & original description: pacid=50590790... 0.12 OrthoFinder output from all 47 species
Dac_g08438 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g00676 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g04526 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
GSVIVT01016110001 No alias ACT domain-containing protein ACR11 OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
LOC_Os08g14440.1 LOC_Os08g14440 ACT domain-containing protein DS12, chloroplastic... 0.04 OrthoFinder output from all 47 species
Len_g02200 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g01045 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g11634 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g26646 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0022.g008572 No alias not classified & original description: CDS=1-756 0.03 OrthoFinder output from all 47 species
Sam_g16409 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc06g068670.3.1 Solyc06g068670 ACT domain-containing protein ACR11 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Spa_g01516 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g13948 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004356 glutamate-ammonia ligase activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006541 glutamine metabolic process IEP HCCA
BP GO:0006542 glutamine biosynthetic process IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009064 glutamine family amino acid metabolic process IEP HCCA
BP GO:0009084 glutamine family amino acid biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016211 ammonia ligase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0020037 heme binding IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!