Description : exoribonuclease *(RRP6L) & original description: none
Gene families : OG0002027 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002027_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Sam_g16356 | |
Cluster | HCCA: Cluster_146 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT2G32415 | No alias | Polynucleotidyl transferase, ribonuclease H fold protein... | 0.02 | OrthoFinder output from all 47 species | |
AT5G35910 | No alias | Polynucleotidyl transferase, ribonuclease H fold protein... | 0.02 | OrthoFinder output from all 47 species | |
Dcu_g13373 | No alias | exoribonuclease *(RRP6L) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ehy_g16804 | No alias | exoribonuclease *(RRP6L) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os10g30100.1 | LOC_Os10g30100 | exoribonuclease (RRP6L) | 0.02 | OrthoFinder output from all 47 species | |
Mp7g12880.1 | No alias | exoribonuclease (RRP6L) | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000049 | tRNA binding | IEP | HCCA |
BP | GO:0000724 | double-strand break repair via homologous recombination | IEP | HCCA |
BP | GO:0000725 | recombinational repair | IEP | HCCA |
MF | GO:0004045 | aminoacyl-tRNA hydrolase activity | IEP | HCCA |
MF | GO:0004386 | helicase activity | IEP | HCCA |
CC | GO:0005667 | transcription regulator complex | IEP | HCCA |
CC | GO:0005672 | transcription factor TFIIA complex | IEP | HCCA |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0006281 | DNA repair | IEP | HCCA |
BP | GO:0006302 | double-strand break repair | IEP | HCCA |
BP | GO:0006310 | DNA recombination | IEP | HCCA |
BP | GO:0006352 | DNA-templated transcription initiation | IEP | HCCA |
BP | GO:0006367 | transcription initiation at RNA polymerase II promoter | IEP | HCCA |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | HCCA |
MF | GO:0008094 | ATP-dependent activity, acting on DNA | IEP | HCCA |
MF | GO:0009055 | electron transfer activity | IEP | HCCA |
BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
BP | GO:0033554 | cellular response to stress | IEP | HCCA |
BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
BP | GO:0051716 | cellular response to stimulus | IEP | HCCA |
MF | GO:0052689 | carboxylic ester hydrolase activity | IEP | HCCA |
BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
CC | GO:0090575 | RNA polymerase II transcription regulator complex | IEP | HCCA |
MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
MF | GO:0140657 | ATP-dependent activity | IEP | HCCA |
MF | GO:0140658 | ATP-dependent chromatin remodeler activity | IEP | HCCA |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
No external refs found! |