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  5. Sam_g16314

Sam_g16314


Description : multifunctional tRNA ligase *(RLG1) & original description: none


Gene families : OG0002159 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002159_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g16314

Target Alias Description ECC score Gene Family Method Actions
Aev_g19782 ATRNL, AtRLG1, RNL multifunctional tRNA ligase *(RLG1) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g11736 ATRNL, AtRLG1, RNL multifunctional tRNA ligase *(RLG1) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18263 ATRNL, AtRLG1, RNL multifunctional tRNA ligase *(RLG1) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g24418 ATRNL, AtRLG1, RNL multifunctional tRNA ligase *(RLG1) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene42901.t1 ATRNL, AtRLG1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g15512 ATRNL, AtRLG1, RNL multifunctional tRNA ligase *(RLG1) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g15639 No alias multifunctional tRNA ligase *(RLG1) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
BP GO:0006457 protein folding IEP HCCA
CC GO:0016459 myosin complex IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!