Sam_g16309


Description : catalytic component *(CesA) of cellulose synthase complex & original description: none


Gene families : OG0000089 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000089_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g16309
Cluster HCCA: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00086120 ATH-A, CESA2,... Cell wall.cellulose.synthesis.cellulose synthase complex... 0.03 OrthoFinder output from all 47 species
AMTR_s00048p00116140 ATCSLD3, KJK,... Cell wall.hemicellulose.heteromannan.synthesis.mannan... 0.02 OrthoFinder output from all 47 species
AMTR_s00057p00116280 ATCSLD5, CSLD5,... Cellulose synthase-like protein D5 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00057p00116410 ATCSLD5, CSLD5,... Cell wall.hemicellulose.heteromannan.synthesis.mannan... 0.02 OrthoFinder output from all 47 species
AMTR_s00081p00171100 AtCESA1, RSW1,... Cell wall.cellulose.synthesis.cellulose synthase complex... 0.03 OrthoFinder output from all 47 species
AMTR_s00103p00124340 IXR1, CEV1,... Cell wall.cellulose.synthesis.cellulose synthase complex... 0.03 OrthoFinder output from all 47 species
AT4G18780 CESA8, LEW2,... cellulose synthase family protein 0.03 OrthoFinder output from all 47 species
AT4G32410 AtCESA1, RSW1, CESA1 cellulose synthase 1 0.04 OrthoFinder output from all 47 species
AT4G38190 ATCSLD4, CSLD4 cellulose synthase like D4 0.04 OrthoFinder output from all 47 species
AT5G05170 IXR1, CEV1,... Cellulose synthase family protein 0.03 OrthoFinder output from all 47 species
AT5G17420 MUR10, ATCESA7,... Cellulose synthase family protein 0.03 OrthoFinder output from all 47 species
AT5G44030 CESA4, NWS2, IRX5 cellulose synthase A4 0.03 OrthoFinder output from all 47 species
AT5G64740 CESA6, PRC1, IXR2, E112 cellulose synthase 6 0.03 OrthoFinder output from all 47 species
Adi_g014232 ATH-A, CESA2, ATCESA2 catalytic component *(CesA) of cellulose synthase... 0.03 OrthoFinder output from all 47 species
Adi_g082474 ATH-A, CESA2, ATCESA2 catalytic component *(CesA) of cellulose synthase... 0.03 OrthoFinder output from all 47 species
Adi_g082875 CESA5 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g104894 IXR1, CEV1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g09892 ATCSLD3, KJK, CSLD3 mannan synthase *(CSLD) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g13769 ATH-A, CESA2, ATCESA2 catalytic component *(CesA) of cellulose synthase... 0.02 OrthoFinder output from all 47 species
Aev_g29681 AtCESA1, RSW1, CESA1 catalytic component *(CesA) of cellulose synthase... 0.03 OrthoFinder output from all 47 species
Aev_g49400 ATH-A, CESA2, ATCESA2 catalytic component *(CesA) of cellulose synthase... 0.03 OrthoFinder output from all 47 species
Ala_g13699 IXR1, CEV1,... catalytic component *(CesA) of cellulose synthase... 0.04 OrthoFinder output from all 47 species
Ala_g14910 ATH-A, CESA2, ATCESA2 catalytic component *(CesA) of cellulose synthase... 0.03 OrthoFinder output from all 47 species
Als_g12758 ATH-A, CESA2, ATCESA2 catalytic component *(CesA) of cellulose synthase... 0.02 OrthoFinder output from all 47 species
Als_g30902 ATH-A, CESA2, ATCESA2 catalytic component *(CesA) of cellulose synthase... 0.06 OrthoFinder output from all 47 species
Als_g34036 IXR1, CEV1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g47693 IXR1, CEV1,... catalytic component *(CesA) of cellulose synthase... 0.05 OrthoFinder output from all 47 species
Als_g50501 IXR1, CEV1,... catalytic component *(CesA) of cellulose synthase... 0.03 OrthoFinder output from all 47 species
Aob_g06076 ATH-A, CESA2, ATCESA2 catalytic component *(CesA) of cellulose synthase... 0.05 OrthoFinder output from all 47 species
Aob_g23590 IXR1, CEV1,... catalytic component *(CesA) of cellulose synthase... 0.02 OrthoFinder output from all 47 species
Aob_g27305 IXR1, CEV1,... catalytic component *(CesA) of cellulose synthase... 0.02 OrthoFinder output from all 47 species
Aob_g30935 IXR1, CEV1,... catalytic component *(CesA) of cellulose synthase... 0.04 OrthoFinder output from all 47 species
Aop_g03236 IXR1, CEV1,... catalytic component *(CesA) of cellulose synthase... 0.04 OrthoFinder output from all 47 species
Aop_g21811 ATH-A, CESA2, ATCESA2 catalytic component *(CesA) of cellulose synthase... 0.04 OrthoFinder output from all 47 species
Aop_g23682 IXR1, CEV1,... catalytic component *(CesA) of cellulose synthase... 0.04 OrthoFinder output from all 47 species
Aop_g70107 IXR1, CEV1,... catalytic component *(CesA) of cellulose synthase... 0.03 OrthoFinder output from all 47 species
Azfi_s0059.g034631 ATH-A, CESA2, ATCESA2 catalytic component *(CesA) of cellulose synthase... 0.03 OrthoFinder output from all 47 species
Azfi_s0095.g043662 AtCESA1, RSW1, CESA1 catalytic component *(CesA) of cellulose synthase... 0.03 OrthoFinder output from all 47 species
Ceric.02G098700.1 IXR1, CEV1,... catalytic component *(CesA) of cellulose synthase... 0.03 OrthoFinder output from all 47 species
Ceric.03G069300.1 AtCESA1, RSW1,... catalytic component *(CesA) of cellulose synthase... 0.02 OrthoFinder output from all 47 species
Ceric.03G080400.1 ATH-A, CESA2,... catalytic component *(CesA) of cellulose synthase... 0.05 OrthoFinder output from all 47 species
Ceric.05G036200.1 IXR1, CEV1,... catalytic component *(CesA) of cellulose synthase... 0.02 OrthoFinder output from all 47 species
Ceric.14G011300.1 ATH-A, CESA2,... catalytic component *(CesA) of cellulose synthase... 0.04 OrthoFinder output from all 47 species
Ceric.30G024300.1 CESA6, PRC1,... catalytic component *(CesA) of cellulose synthase... 0.03 OrthoFinder output from all 47 species
Ceric.37G017400.1 AtCESA1, RSW1,... catalytic component *(CesA) of cellulose synthase... 0.04 OrthoFinder output from all 47 species
Dac_g01048 ATCSLD3, KJK, CSLD3 mannan synthase *(CSLD) & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g10159 IXR1, CEV1,... catalytic component *(CesA) of cellulose synthase... 0.03 OrthoFinder output from all 47 species
Dac_g14092 IXR1, CEV1,... catalytic component *(CesA) of cellulose synthase... 0.03 OrthoFinder output from all 47 species
Dac_g20850 ATH-A, CESA2, ATCESA2 catalytic component *(CesA) of cellulose synthase... 0.07 OrthoFinder output from all 47 species
Dac_g21512 AtCESA1, RSW1, CESA1 catalytic component *(CesA) of cellulose synthase... 0.03 OrthoFinder output from all 47 species
Dcu_g09052 ATH-A, CESA2, ATCESA2 catalytic component *(CesA) of cellulose synthase... 0.05 OrthoFinder output from all 47 species
Dcu_g12277 IXR1, CEV1,... catalytic component *(CesA) of cellulose synthase... 0.03 OrthoFinder output from all 47 species
Dcu_g31447 AtCESA1, RSW1, CESA1 catalytic component *(CesA) of cellulose synthase... 0.03 OrthoFinder output from all 47 species
Dde_g50099 ATH-A, CESA2, ATCESA2 catalytic component *(CesA) of cellulose synthase... 0.03 OrthoFinder output from all 47 species
Ehy_g04030 IXR1, CEV1,... catalytic component *(CesA) of cellulose synthase... 0.03 OrthoFinder output from all 47 species
Ehy_g06173 IXR1, CEV1,... catalytic component *(CesA) of cellulose synthase... 0.06 OrthoFinder output from all 47 species
Ehy_g06186 CESA09, CESA9 catalytic component *(CesA) of cellulose synthase... 0.04 OrthoFinder output from all 47 species
Ehy_g06204 IXR1, CEV1,... catalytic component *(CesA) of cellulose synthase... 0.04 OrthoFinder output from all 47 species
Ehy_g06209 CESA6, PRC1, IXR2, E112 catalytic component *(CesA) of cellulose synthase... 0.02 OrthoFinder output from all 47 species
Ehy_g27465 ATH-A, CESA2, ATCESA2 catalytic component *(CesA) of cellulose synthase... 0.02 OrthoFinder output from all 47 species
GSVIVT01021248001 CESA8, LEW2,... Cell wall.cellulose.synthesis.cellulose synthase complex... 0.03 OrthoFinder output from all 47 species
GSVIVT01023643001 MUR10, ATCESA7,... Cell wall.cellulose.synthesis.cellulose synthase complex... 0.03 OrthoFinder output from all 47 species
GSVIVT01028402001 CESA4, NWS2, IRX5 Cell wall.cellulose.synthesis.cellulose synthase complex... 0.02 OrthoFinder output from all 47 species
GSVIVT01034552001 ATH-A, CESA2, ATCESA2 Cell wall.cellulose.synthesis.cellulose synthase complex... 0.04 OrthoFinder output from all 47 species
Gb_05828 AtCESA1, RSW1, CESA1 catalytic component CesA of cellulose synthase complex 0.02 OrthoFinder output from all 47 species
Gb_07428 AtCESA1, RSW1, CESA1 catalytic component CesA of cellulose synthase complex 0.03 OrthoFinder output from all 47 species
Gb_17419 CESA4, NWS2, IRX5 catalytic component CesA of cellulose synthase complex 0.03 OrthoFinder output from all 47 species
Gb_25795 IXR1, CEV1,... catalytic component CesA of cellulose synthase complex 0.02 OrthoFinder output from all 47 species
Gb_31853 MUR10, ATCESA7,... catalytic component CesA of cellulose synthase complex 0.03 OrthoFinder output from all 47 species
LOC_Os03g59340.1 IXR1, CEV1,... catalytic component CesA of cellulose synthase complex 0.02 OrthoFinder output from all 47 species
LOC_Os03g62090.1 CESA6, PRC1,... catalytic component CesA of cellulose synthase complex 0.04 OrthoFinder output from all 47 species
LOC_Os05g08370.1 AtCESA1, RSW1,... catalytic component CesA of cellulose synthase complex 0.05 OrthoFinder output from all 47 species
LOC_Os07g10770.1 IXR1, CEV1,... catalytic component CesA of cellulose synthase complex 0.05 OrthoFinder output from all 47 species
LOC_Os07g14850.1 ATH-A, CESA2,... catalytic component CesA of cellulose synthase complex 0.03 OrthoFinder output from all 47 species
LOC_Os07g24190.1 CESA6, PRC1,... catalytic component CesA of cellulose synthase complex 0.02 OrthoFinder output from all 47 species
LOC_Os08g06380.1 ATCSLD2, CSLD2,... mannan synthase (CSLD). D-glucan synthase (CSLF) 0.03 OrthoFinder output from all 47 species
LOC_Os08g25710.1 ATCSLD4, CSLD4,... mannan synthase (CSLD) 0.02 OrthoFinder output from all 47 species
Len_g10968 ATH-A, CESA2, ATCESA2 catalytic component *(CesA) of cellulose synthase... 0.06 OrthoFinder output from all 47 species
Len_g11261 AtCESA1, RSW1, CESA1 catalytic component *(CesA) of cellulose synthase... 0.06 OrthoFinder output from all 47 species
Len_g19077 ATH-A, CESA2, ATCESA2 catalytic component *(CesA) of cellulose synthase... 0.03 OrthoFinder output from all 47 species
Len_g21269 IXR1, CEV1,... catalytic component *(CesA) of cellulose synthase... 0.03 OrthoFinder output from all 47 species
Lfl_g06718 AtCESA1, RSW1, CESA1 catalytic component *(CesA) of cellulose synthase... 0.03 OrthoFinder output from all 47 species
Lfl_g18769 IXR1, CEV1,... catalytic component *(CesA) of cellulose synthase... 0.02 OrthoFinder output from all 47 species
MA_10429177g0010 CESA8, LEW2,... catalytic component CesA of cellulose synthase complex 0.02 OrthoFinder output from all 47 species
MA_10435322g0010 AtCESA1, RSW1, CESA1 Probable cellulose synthase A catalytic subunit 2... 0.03 OrthoFinder output from all 47 species
MA_183130g0010 CESA4, NWS2, IRX5 catalytic component CesA of cellulose synthase complex 0.02 OrthoFinder output from all 47 species
MA_8061832g0010 CESA4, NWS2, IRX5 Cellulose synthase A catalytic subunit 4 [UDP-forming]... 0.02 OrthoFinder output from all 47 species
Mp7g07800.1 AtCESA1, RSW1, CESA1 catalytic component CesA of cellulose synthase complex 0.05 OrthoFinder output from all 47 species
Msp_g06842 IXR1, CEV1,... catalytic component *(CesA) of cellulose synthase... 0.04 OrthoFinder output from all 47 species
Msp_g16092 ATH-A, CESA2, ATCESA2 catalytic component *(CesA) of cellulose synthase... 0.03 OrthoFinder output from all 47 species
Msp_g28023 CESA5 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g31765 AtCESA1, RSW1, CESA1 catalytic component *(CesA) of cellulose synthase... 0.04 OrthoFinder output from all 47 species
Msp_g34027 ATH-A, CESA2, ATCESA2 catalytic component *(CesA) of cellulose synthase... 0.05 OrthoFinder output from all 47 species
Nbi_g10184 IXR1, CEV1,... catalytic component *(CesA) of cellulose synthase... 0.02 OrthoFinder output from all 47 species
Nbi_g21980 IXR1, CEV1,... catalytic component *(CesA) of cellulose synthase... 0.02 OrthoFinder output from all 47 species
Nbi_g25978 IXR1, CEV1,... catalytic component *(CesA) of cellulose synthase... 0.04 OrthoFinder output from all 47 species
Nbi_g26244 ATH-A, CESA2, ATCESA2 catalytic component *(CesA) of cellulose synthase... 0.02 OrthoFinder output from all 47 species
Ore_g06388 ATH-A, CESA2, ATCESA2 catalytic component *(CesA) of cellulose synthase... 0.02 OrthoFinder output from all 47 species
Ore_g09621 MUR10, ATCESA7,... catalytic component *(CesA) of cellulose synthase... 0.05 OrthoFinder output from all 47 species
Ore_g12166 ATH-A, CESA2, ATCESA2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g36488 ATH-A, CESA2, ATCESA2 catalytic component *(CesA) of cellulose synthase... 0.06 OrthoFinder output from all 47 species
Pir_g01693 AtCESA1, RSW1, CESA1 catalytic component *(CesA) of cellulose synthase... 0.03 OrthoFinder output from all 47 species
Pir_g02585 ATH-A, CESA2, ATCESA2 catalytic component *(CesA) of cellulose synthase... 0.04 OrthoFinder output from all 47 species
Pir_g19942 ATH-A, CESA2, ATCESA2 catalytic component *(CesA) of cellulose synthase... 0.05 OrthoFinder output from all 47 species
Pnu_g10485 AtCESA1, RSW1, CESA1 catalytic component *(CesA) of cellulose synthase... 0.02 OrthoFinder output from all 47 species
Pnu_g13304 ATH-A, CESA2, ATCESA2 catalytic component *(CesA) of cellulose synthase... 0.03 OrthoFinder output from all 47 species
Pnu_g18983 IXR1, CEV1,... catalytic component *(CesA) of cellulose synthase... 0.02 OrthoFinder output from all 47 species
Ppi_g10495 ATCSLD3, KJK, CSLD3 mannan synthase *(CSLD) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g16136 ATCSLD5, CSLD5, SOS6 mannan synthase *(CSLD) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g30689 AtCESA1, RSW1, CESA1 catalytic component *(CesA) of cellulose synthase... 0.05 OrthoFinder output from all 47 species
Ppi_g60444 ATH-A, CESA2, ATCESA2 catalytic component *(CesA) of cellulose synthase... 0.05 OrthoFinder output from all 47 species
Smo163575 IXR1, CEV1,... Cell wall.cellulose.synthesis.cellulose synthase complex... 0.04 OrthoFinder output from all 47 species
Smo73698 AtCESA1, RSW1, CESA1 Cell wall.cellulose.synthesis.cellulose synthase complex... 0.02 OrthoFinder output from all 47 species
Solyc01g067520.3.1 ATCSLD4, CSLD4,... mannan synthase (CSLD) 0.02 OrthoFinder output from all 47 species
Solyc01g087210.3.1 IXR1, CEV1,... catalytic component CesA of cellulose synthase complex 0.05 OrthoFinder output from all 47 species
Solyc04g071650.4.1 ATH-A, CESA2,... catalytic component CesA of cellulose synthase complex 0.06 OrthoFinder output from all 47 species
Solyc05g053560.4.1 CSLD1, ATCSLD1,... mannan synthase (CSLD) 0.02 OrthoFinder output from all 47 species
Solyc08g061100.3.1 AtCESA1, RSW1,... catalytic component CesA of cellulose synthase complex 0.02 OrthoFinder output from all 47 species
Solyc09g075550.3.1 ATCSLD5, CSLD5,... mannan synthase (CSLD) 0.02 OrthoFinder output from all 47 species
Solyc12g056580.2.1 ATH-A, CESA2,... catalytic component CesA of cellulose synthase complex 0.03 OrthoFinder output from all 47 species
Spa_g05758 AtCESA1, RSW1, CESA1 catalytic component *(CesA) of cellulose synthase... 0.05 OrthoFinder output from all 47 species
Spa_g21970 IXR1, CEV1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g26209 ATH-A, CESA2, ATCESA2 catalytic component *(CesA) of cellulose synthase... 0.04 OrthoFinder output from all 47 species
Spa_g26389 IXR1, CEV1,... catalytic component *(CesA) of cellulose synthase... 0.02 OrthoFinder output from all 47 species
Spa_g26496 IXR1, CEV1,... catalytic component *(CesA) of cellulose synthase... 0.03 OrthoFinder output from all 47 species
Spa_g26805 IXR1, CEV1,... catalytic component *(CesA) of cellulose synthase... 0.03 OrthoFinder output from all 47 species
Spa_g39807 ATH-A, CESA2, ATCESA2 catalytic component *(CesA) of cellulose synthase... 0.04 OrthoFinder output from all 47 species
Spa_g40617 ATCSLD2, CSLD2 mannan synthase *(CSLD) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g49131 ATH-A, CESA2, ATCESA2 catalytic component *(CesA) of cellulose synthase... 0.02 OrthoFinder output from all 47 species
Tin_g13995 ATH-A, CESA2, ATCESA2 catalytic component *(CesA) of cellulose synthase... 0.05 OrthoFinder output from all 47 species
Tin_g19698 ATCSLD3, KJK, CSLD3 mannan synthase *(CSLD) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g39887 AtCESA1, RSW1, CESA1 catalytic component *(CesA) of cellulose synthase... 0.04 OrthoFinder output from all 47 species
Tin_g41125 IXR1, CEV1,... catalytic component *(CesA) of cellulose synthase... 0.03 OrthoFinder output from all 47 species
Zm00001e004630_P001 CESA4, NWS2,... catalytic component CesA of cellulose synthase complex 0.03 OrthoFinder output from all 47 species
Zm00001e009406_P001 IXR1, CEV1,... catalytic component CesA of cellulose synthase complex 0.03 OrthoFinder output from all 47 species
Zm00001e009592_P002 ATH-A, CESA2,... catalytic component CesA of cellulose synthase complex 0.02 OrthoFinder output from all 47 species
Zm00001e009843_P002 MUR10, ATCESA7,... catalytic component CesA of cellulose synthase complex 0.03 OrthoFinder output from all 47 species
Zm00001e019828_P001 CESA8, LEW2,... catalytic component CesA of cellulose synthase complex 0.03 OrthoFinder output from all 47 species
Zm00001e021697_P002 ATCSLD2, CSLD2,... mannan synthase (CSLD). D-glucan synthase (CSLF) 0.02 OrthoFinder output from all 47 species
Zm00001e026711_P001 AtCESA1, RSW1,... catalytic component CesA of cellulose synthase complex 0.03 OrthoFinder output from all 47 species
Zm00001e031187_P001 AtCESA1, RSW1,... catalytic component CesA of cellulose synthase complex 0.03 OrthoFinder output from all 47 species
Zm00001e033093_P003 IXR1, CEV1,... catalytic component CesA of cellulose synthase complex 0.04 OrthoFinder output from all 47 species
Zm00001e033375_P001 ATH-A, CESA2,... catalytic component CesA of cellulose synthase complex 0.04 OrthoFinder output from all 47 species
Zm00001e034187_P001 MUR10, ATCESA7,... catalytic component CesA of cellulose synthase complex 0.03 OrthoFinder output from all 47 species
Zm00001e040201_P001 ATCSLD2, CSLD2,... mannan synthase (CSLD). D-glucan synthase (CSLF) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0016760 cellulose synthase (UDP-forming) activity IEA Interproscan
BP GO:0030244 cellulose biosynthetic process IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity IEP HCCA
BP GO:0001932 regulation of protein phosphorylation IEP HCCA
BP GO:0019220 regulation of phosphate metabolic process IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0019900 kinase binding IEP HCCA
MF GO:0019901 protein kinase binding IEP HCCA
BP GO:0031399 regulation of protein modification process IEP HCCA
BP GO:0042325 regulation of phosphorylation IEP HCCA
BP GO:0043549 regulation of kinase activity IEP HCCA
BP GO:0045859 regulation of protein kinase activity IEP HCCA
BP GO:0050790 regulation of catalytic activity IEP HCCA
MF GO:0051087 chaperone binding IEP HCCA
BP GO:0051174 regulation of phosphorus metabolic process IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
BP GO:0051338 regulation of transferase activity IEP HCCA
BP GO:0051726 regulation of cell cycle IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA
BP GO:0071900 regulation of protein serine/threonine kinase activity IEP HCCA
BP GO:1904029 regulation of cyclin-dependent protein kinase activity IEP HCCA
InterPro domains Description Start Stop
IPR005150 Cellulose_synth 362 1092
IPR027934 CES_Znf_RING 28 104
No external refs found!