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  5. Sam_g16251

Sam_g16251


Description : substrate adaptor of CUL3-BTB E3 ubiquitin ligase *(ETO) & original description: none


Gene families : OG0002753 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002753_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g16251

Target Alias Description ECC score Gene Family Method Actions
AT3G51770 ATEOL1, ETO1 tetratricopeptide repeat (TPR)-containing protein 0.02 OrthoFinder output from all 47 species
Adi_g115512 ATEOL1, ETO1 substrate adaptor of CUL3-BTB E3 ubiquitin ligase *(ETO)... 0.03 OrthoFinder output from all 47 species
Aev_g04169 EOL1 substrate adaptor of CUL3-BTB E3 ubiquitin ligase *(ETO)... 0.02 OrthoFinder output from all 47 species
Aspi01Gene31958.t1 ATEOL1, ETO1,... substrate adaptor of CUL3-BTB E3 ubiquitin ligase *(ETO)... 0.04 OrthoFinder output from all 47 species
Dac_g05777 EOL1 substrate adaptor of CUL3-BTB E3 ubiquitin ligase *(ETO)... 0.02 OrthoFinder output from all 47 species
MA_10427030g0010 EOL1 regulator protein (ETO) 0.02 OrthoFinder output from all 47 species
Nbi_g03834 EOL1 substrate adaptor of CUL3-BTB E3 ubiquitin ligase *(ETO)... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000428 DNA-directed RNA polymerase complex IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005666 RNA polymerase III complex IEP HCCA
CC GO:0005741 mitochondrial outer membrane IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006383 transcription by RNA polymerase III IEP HCCA
CC GO:0016020 membrane IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
CC GO:0030880 RNA polymerase complex IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
CC GO:0031968 organelle outer membrane IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
CC GO:0055029 nuclear DNA-directed RNA polymerase complex IEP HCCA
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR019734 TPR_repeat 715 743
No external refs found!