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  5. Sam_g16193

Sam_g16193


Description : DNA polymerase *(REV1) & original description: none


Gene families : OG0005198 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005198_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g16193

Target Alias Description ECC score Gene Family Method Actions
Aob_g17612 REV1, ATREV1 DNA polymerase *(REV1) & original description: none 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000691.4 REV1, ATREV1 DNA repair protein REV1 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Cre12.g550800 REV1, ATREV1 DNA damage response.DNA repair polymerase activities.DNA... 0.01 OrthoFinder output from all 47 species
Ppi_g18093 REV1, ATREV1 DNA polymerase *(REV1) & original description: none 0.03 OrthoFinder output from all 47 species
Smo445125 REV1, ATREV1 DNA damage response.DNA repair polymerase activities.DNA... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003684 damaged DNA binding IEA Interproscan
BP GO:0006281 DNA repair IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0004402 histone acetyltransferase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006473 protein acetylation IEP HCCA
BP GO:0006475 internal protein amino acid acetylation IEP HCCA
BP GO:0006914 autophagy IEP HCCA
MF GO:0008080 N-acetyltransferase activity IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016573 histone acetylation IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
BP GO:0018393 internal peptidyl-lysine acetylation IEP HCCA
BP GO:0018394 peptidyl-lysine acetylation IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0034212 peptide N-acetyltransferase activity IEP HCCA
BP GO:0043543 protein acylation IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP HCCA
BP GO:0061919 process utilizing autophagic mechanism IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
InterPro domains Description Start Stop
IPR001357 BRCT_dom 88 175
IPR024728 PolY_HhH_motif 535 563
IPR001126 UmuC 376 520
IPR017961 DNA_pol_Y-fam_little_finger 608 725
No external refs found!