Sam_g16183


Description : not classified & original description: none


Gene families : OG0000058 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g16183

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00103p00053720 ATLOX1, LOX1,... Probable linoleate 9S-lipoxygenase 8 OS=Solanum tuberosum 0.02 OrthoFinder output from all 47 species
Adi_g002717 ATLOX1, LOX1 EC_1.13 oxidoreductase acting on single donor with... 0.02 OrthoFinder output from all 47 species
Adi_g006255 ATLOX1, LOX1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g075774 ATLOX1, LOX1 EC_1.13 oxidoreductase acting on single donor with... 0.02 OrthoFinder output from all 47 species
Als_g50198 LOX4 EC_1.13 oxidoreductase acting on single donor with... 0.03 OrthoFinder output from all 47 species
Aob_g20374 LOX5 EC_1.13 oxidoreductase acting on single donor with... 0.02 OrthoFinder output from all 47 species
Aob_g28213 LOX4 EC_1.13 oxidoreductase acting on single donor with... 0.03 OrthoFinder output from all 47 species
Aop_g05772 LOX4 EC_1.13 oxidoreductase acting on single donor with... 0.04 OrthoFinder output from all 47 species
Aop_g22112 LOX3 EC_1.13 oxidoreductase acting on single donor with... 0.03 OrthoFinder output from all 47 species
Aop_g22113 ATLOX1, LOX1 EC_1.13 oxidoreductase acting on single donor with... 0.03 OrthoFinder output from all 47 species
Aop_g22345 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene19163.t1 ATLOX1, LOX1,... EC_1.13 oxidoreductase acting on single donor with... 0.02 OrthoFinder output from all 47 species
Azfi_s0032.g024974 LOX3 EC_1.13 oxidoreductase acting on single donor with... 0.02 OrthoFinder output from all 47 species
Azfi_s0035.g025709 LOX3 EC_1.13 oxidoreductase acting on single donor with... 0.02 OrthoFinder output from all 47 species
Azfi_s0206.g057843 ATLOX1, LOX1 EC_1.13 oxidoreductase acting on single donor with... 0.04 OrthoFinder output from all 47 species
Azfi_s0272.g061300 LOX3 EC_1.13 oxidoreductase acting on single donor with... 0.03 OrthoFinder output from all 47 species
Ceric.04G101300.1 ATLOX1, LOX1,... EC_1.13 oxidoreductase acting on single donor with... 0.02 OrthoFinder output from all 47 species
Dcu_g50588 ATLOX1, LOX1 EC_1.13 oxidoreductase acting on single donor with... 0.03 OrthoFinder output from all 47 species
Dcu_g51837 ATLOX1, LOX1 EC_1.13 oxidoreductase acting on single donor with... 0.02 OrthoFinder output from all 47 species
Dde_g39061 LOX3 EC_1.13 oxidoreductase acting on single donor with... 0.03 OrthoFinder output from all 47 species
Dde_g47024 LOX3 EC_1.13 oxidoreductase acting on single donor with... 0.03 OrthoFinder output from all 47 species
Ehy_g09983 LOX5 EC_1.13 oxidoreductase acting on single donor with... 0.02 OrthoFinder output from all 47 species
GSVIVT01000084001 ATLOX1, LOX1 Enzyme classification.EC_1 oxidoreductases.EC_1.13... 0.02 OrthoFinder output from all 47 species
GSVIVT01005215001 LOX3 Linoleate 13S-lipoxygenase 3-1, chloroplastic OS=Solanum... 0.02 OrthoFinder output from all 47 species
GSVIVT01025339001 ATLOX2, LOX2 Phytohormones.jasmonic acid.synthesis.13-lipoxygenase 0.02 OrthoFinder output from all 47 species
Gb_16198 LOX4 13-lipoxygenase 0.04 OrthoFinder output from all 47 species
LOC_Os03g52860.1 ATLOX1, LOX1,... Linoleate 9S-lipoxygenase 2 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
LOC_Os08g39840.1 ATLOX2, LOX2,... 13-lipoxygenase 0.02 OrthoFinder output from all 47 species
MA_10436100g0020 LOX5 Enzyme classification.EC_1 oxidoreductases.EC_1.13... 0.02 OrthoFinder output from all 47 species
Mp2g16000.1 ATLOX1, LOX1 Enzyme classification.EC_1 oxidoreductases.EC_1.13... 0.04 OrthoFinder output from all 47 species
Mp2g20300.1 LOX3 Linoleate 13S-lipoxygenase 3-1, chloroplastic OS=Solanum... 0.02 OrthoFinder output from all 47 species
Mp2g23370.1 LOX4 Enzyme classification.EC_1 oxidoreductases.EC_1.13... 0.03 OrthoFinder output from all 47 species
Mp3g06610.1 ATLOX1, LOX1 Enzyme classification.EC_1 oxidoreductases.EC_1.13... 0.03 OrthoFinder output from all 47 species
Mp8g08690.1 ATLOX1, LOX1 Enzyme classification.EC_1 oxidoreductases.EC_1.13... 0.04 OrthoFinder output from all 47 species
Mp8g15570.1 ATLOX1, LOX1 Enzyme classification.EC_1 oxidoreductases.EC_1.13... 0.03 OrthoFinder output from all 47 species
Msp_g48879 ATLOX1, LOX1 EC_1.13 oxidoreductase acting on single donor with... 0.03 OrthoFinder output from all 47 species
Pir_g60175 ATLOX1, LOX1 EC_1.13 oxidoreductase acting on single donor with... 0.03 OrthoFinder output from all 47 species
Pnu_g10066 ATLOX1, LOX1 EC_1.13 oxidoreductase acting on single donor with... 0.03 OrthoFinder output from all 47 species
Pp3c14_15340V3.1 Pp3c14_15340 lipoxygenase 1 0.01 OrthoFinder output from all 47 species
Ppi_g07346 ATLOX1, LOX1 EC_1.13 oxidoreductase acting on single donor with... 0.03 OrthoFinder output from all 47 species
Ppi_g21799 LOX5 EC_1.13 oxidoreductase acting on single donor with... 0.03 OrthoFinder output from all 47 species
Sam_g38188 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo402721 LOX3 Enzyme classification.EC_1 oxidoreductases.EC_1.13... 0.03 OrthoFinder output from all 47 species
Smo446635 ATLOX1, LOX1 Enzyme classification.EC_1 oxidoreductases.EC_1.13... 0.02 OrthoFinder output from all 47 species
Solyc01g099160.4.1 ATLOX1, LOX1,... Probable linoleate 9S-lipoxygenase 5 OS=Solanum... 0.03 OrthoFinder output from all 47 species
Solyc10g046870.1.1 LOX4, Solyc10g046870 Linoleate 13S-lipoxygenase 3-1, chloroplastic OS=Solanum... 0.02 OrthoFinder output from all 47 species
Solyc12g011037.1.1 LOX4, Solyc12g011037 Linoleate 13S-lipoxygenase 2-1, chloroplastic OS=Solanum... 0.02 OrthoFinder output from all 47 species
Spa_g05904 ATLOX1, LOX1 EC_1.13 oxidoreductase acting on single donor with... 0.02 OrthoFinder output from all 47 species
Spa_g46599 LOX3 EC_1.13 oxidoreductase acting on single donor with... 0.02 OrthoFinder output from all 47 species
Tin_g07532 ATLOX1, LOX1 EC_1.13 oxidoreductase acTing on single donor with... 0.03 OrthoFinder output from all 47 species
Tin_g07685 LOX3 EC_1.13 oxidoreductase acTing on single donor with... 0.02 OrthoFinder output from all 47 species
Tin_g22963 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e003543_P001 ATLOX2, LOX2,... 13-lipoxygenase 0.02 OrthoFinder output from all 47 species
Zm00001e005363_P001 ATLOX1, LOX1,... Probable linoleate 9S-lipoxygenase 4 OS=Oryza sativa... 0.04 OrthoFinder output from all 47 species
Zm00001e025034_P001 ATLOX2, LOX2,... 13-lipoxygenase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
MF GO:0009916 alternative oxidase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP HCCA
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:2001070 starch binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!