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  5. Sam_g16174

Sam_g16174


Description : EC_6.2 ligase forming carbon-sulfur bond & original description: none


Gene families : OG0001834 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001834_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g16174

Target Alias Description ECC score Gene Family Method Actions
Adi_g004524 ACS EC_6.2 ligase forming carbon-sulfur bond & original... 0.03 OrthoFinder output from all 47 species
Aop_g18208 ACS EC_6.2 ligase forming carbon-sulfur bond & original... 0.04 OrthoFinder output from all 47 species
Azfi_s0010.g012438 ACS EC_6.2 ligase forming carbon-sulfur bond & original... 0.03 OrthoFinder output from all 47 species
Ceric.21G080800.1 ACS, Ceric.21G080800 EC_6.2 ligase forming carbon-sulfur bond & original... 0.09 OrthoFinder output from all 47 species
Pir_g41401 ACS EC_6.2 ligase forming carbon-sulfur bond & original... 0.03 OrthoFinder output from all 47 species
Solyc02g094640.4.1 ACS, Solyc02g094640 acetyl-CoA synthetase 0.05 OrthoFinder output from all 47 species
Spa_g30802 ACS EC_6.2 ligase forming carbon-sulfur bond & original... 0.03 OrthoFinder output from all 47 species
Tin_g15479 ACS EC_6.2 ligase forming carbon-sulfur bond & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0010181 FMN binding IEP HCCA
MF GO:0015930 glutamate synthase activity IEP HCCA
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR000873 AMP-dep_Synth/Lig_com 68 509
IPR025110 AMP-bd_C 518 596
IPR032387 ACAS_N 1 61
No external refs found!