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  5. Sam_g16092

Sam_g16092


Description : UDP-L-arabinose mutase & original description: none


Gene families : OG0001238 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001238_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g16092
Cluster HCCA: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
AT5G15650 RGP2, ATRGP2 reversibly glycosylated polypeptide 2 0.03 OrthoFinder output from all 47 species
Aev_g40610 ATRGP1, RGP1 UDP-L-arabinose mutase & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g06621 ATRGP1, RGP1 UDP-L-arabinose mutase & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g12775 ATRGP1, RGP1 UDP-L-arabinose mutase & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g03094 ATRGP1, RGP1 UDP-L-arabinose mutase & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.33G002800.1 ATRGP1, RGP1,... UDP-L-arabinose mutase & original description:... 0.04 OrthoFinder output from all 47 species
Gb_21665 ATRGP1, RGP1 UDP-L-arabinose mutase 0.02 OrthoFinder output from all 47 species
LOC_Os03g40270.1 RGP2, ATRGP2,... UDP-L-arabinose mutase 0.04 OrthoFinder output from all 47 species
LOC_Os07g41360.1 ATRGP1, RGP1,... UDP-L-arabinose mutase 0.02 OrthoFinder output from all 47 species
Len_g04222 ATRGP1, RGP1 UDP-L-arabinose mutase & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g34861 ATRGP1, RGP1 UDP-L-arabinose mutase & original description: none 0.03 OrthoFinder output from all 47 species
Mp2g10790.1 RGP3, RGP UDP-L-arabinose mutase 0.02 OrthoFinder output from all 47 species
Mp2g10800.1 ATRGP1, RGP1 UDP-L-arabinose mutase 0.03 OrthoFinder output from all 47 species
Msp_g01532 ATRGP1, RGP1 UDP-L-arabinose mutase & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g09927 ATRGP1, RGP1 UDP-L-arabinose mutase & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g01554 RGP3, RGP UDP-L-arabinose mutase & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g01655 ATRGP1, RGP1 UDP-L-arabinose mutase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g15549 ATRGP1, RGP1 UDP-L-arabinose mutase & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0045.g013218 ATRGP1, RGP1 UDP-L-arabinose mutase & original description: CDS=186-1241 0.03 OrthoFinder output from all 47 species
Solyc05g012070.3.1 ATRGP1, RGP1,... UDP-L-arabinose mutase 0.02 OrthoFinder output from all 47 species
Spa_g24163 ATRGP1, RGP1 UDP-L-arabinose mutase & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g55000 ATRGP1, RGP1 UDP-L-arabinose mutase & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g40978 RGP3, RGP UDP-L-arabinose mutase & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e012459_P003 RGP2, ATRGP2,... UDP-L-arabinose mutase 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0004478 methionine adenosyltransferase activity IEP HCCA
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0046500 S-adenosylmethionine metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR037595 RGP_fam 4 337
No external refs found!