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  5. Lfl_g26962

Lfl_g26962


Description : not classified & original description: none


Gene families : OG0000766 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000766_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g26962
Cluster HCCA: Cluster_52

Target Alias Description ECC score Gene Family Method Actions
Adi_g079686 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.20G003500.1 Ceric.20G003500 not classified & original description: pacid=50566972... 0.03 OrthoFinder output from all 47 species
Ceric.36G029200.1 Ceric.36G029200 not classified & original description: pacid=50568759... 0.02 OrthoFinder output from all 47 species
Dcu_g14156 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01032481001 No alias Uncharacterized protein At4g28440 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_31185 No alias Uncharacterized protein At4g28440 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
LOC_Os01g13700.1 LOC_Os01g13700 Uncharacterized protein At4g28440 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Len_g02616 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g05185 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10427215g0010 No alias Uncharacterized protein At4g28440 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Msp_g33156 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g00450 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pp3c6_620V3.1 Pp3c6_620 Nucleic acid-binding, OB-fold-like protein 0.01 OrthoFinder output from all 47 species
Sam_g06215 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g40428 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo97896 No alias Uncharacterized protein At4g28440 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Solyc07g053690.3.1 Solyc07g053690 Uncharacterized protein At4g28440 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Spa_g13140 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g03632 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e028239_P001 Zm00001e028239 Uncharacterized protein At4g28440 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Zm00001e029794_P001 Zm00001e029794 Uncharacterized protein At4g28440 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004478 methionine adenosyltransferase activity IEP HCCA
MF GO:0004618 phosphoglycerate kinase activity IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0032182 ubiquitin-like protein binding IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
MF GO:0043130 ubiquitin binding IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046500 S-adenosylmethionine metabolic process IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!