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  5. Sam_g16016

Sam_g16016


Description : component *(Tic62) of inner envelope TIC translocation system & original description: none


Gene families : OG0001315 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001315_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g16016
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
AT2G34460 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.04 OrthoFinder output from all 47 species
AT3G18890 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.06 OrthoFinder output from all 47 species
Adi_g115349 TROL not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g02963 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g08850 No alias component *(Tic62) of inner envelope TIC translocation... 0.04 OrthoFinder output from all 47 species
Aop_g26310 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene06173.t1 Aspi01Gene06173 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g34938 No alias component *(Tic62) of inner envelope TIC translocation... 0.07 OrthoFinder output from all 47 species
Ceric.1Z144700.1 Ceric.1Z144700 component *(Tic62) of inner envelope TIC translocation... 0.03 OrthoFinder output from all 47 species
Cre06.g269050 No alias Protein translocation.chloroplast.inner envelope TIC... 0.02 OrthoFinder output from all 47 species
Ehy_g00919 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g16505 No alias component *(Tic62) of inner envelope TIC translocation... 0.04 OrthoFinder output from all 47 species
GSVIVT01031907001 No alias Protein translocation.chloroplast.inner envelope TIC... 0.03 OrthoFinder output from all 47 species
Len_g45580 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Len_g45581 No alias component *(Tic62) of inner envelope TIC translocation... 0.07 OrthoFinder output from all 47 species
Lfl_g10375 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10429419g0010 No alias Protein TIC 62, chloroplastic OS=Pisum sativum... 0.03 OrthoFinder output from all 47 species
MA_332596g0010 No alias Uncharacterized protein At2g34460, chloroplastic... 0.02 OrthoFinder output from all 47 species
Msp_g09975 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g09976 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g15467 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g19097 No alias component *(Tic62) of inner envelope TIC translocation... 0.02 OrthoFinder output from all 47 species
Nbi_g25487 No alias component *(Tic62) of inner envelope TIC translocation... 0.04 OrthoFinder output from all 47 species
Ore_g13449 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g32758 No alias component *(Tic62) of inner envelope TIC translocation... 0.02 OrthoFinder output from all 47 species
Pnu_g17928 No alias component *(Tic62) of inner envelope TIC translocation... 0.03 OrthoFinder output from all 47 species
Ppi_g16820 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0019.g007763 No alias not classified & original description: CDS=26-871 0.05 OrthoFinder output from all 47 species
Solyc10g051110.1.1 Solyc10g051110 TIC62 protein involved in ferredoxin-NADP oxidoreductase... 0.04 OrthoFinder output from all 47 species
Spa_g00929 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g06152 No alias component *(Tic62) of inner envelope TIC translocation... 0.03 OrthoFinder output from all 47 species
Spa_g21915 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e003804_P002 Zm00001e003804 Uncharacterized protein At2g34460, chloroplastic... 0.02 OrthoFinder output from all 47 species
Zm00001e011593_P001 Zm00001e011593 TIC62 protein involved in ferredoxin-NADP oxidoreductase... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004618 phosphoglycerate kinase activity IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP HCCA
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
InterPro domains Description Start Stop
IPR016040 NAD(P)-bd_dom 173 329
No external refs found!