Sam_g15789


Description : not classified & original description: none


Gene families : OG0004023 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004023_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g15789

Target Alias Description ECC score Gene Family Method Actions
Adi_g012590 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g15637 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0032.g024689 No alias not classified & original description: CDS=239-2569 0.04 OrthoFinder output from all 47 species
Ceric.1Z219100.1 Ceric.1Z219100 not classified & original description: pacid=50617071... 0.05 OrthoFinder output from all 47 species
Ceric.23G078700.1 Ceric.23G078700 not classified & original description: pacid=50610433... 0.05 OrthoFinder output from all 47 species
Dac_g16300 CRM3, HCF152 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g23808 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g09268 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g29928 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g14876 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g15440 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g16749 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g01887 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g13127 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g38642 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g08780 CRM3, HCF152 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g14407 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g01185 CRM3, HCF152 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g10297 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g15086 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g31150 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0030151 molybdenum ion binding IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 419 468
IPR002885 Pentatricopeptide_repeat 353 375
IPR002885 Pentatricopeptide_repeat 284 310
IPR002885 Pentatricopeptide_repeat 387 416
IPR002885 Pentatricopeptide_repeat 198 241
No external refs found!