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  5. Sam_g15729

Sam_g15729


Description : not classified & original description: none


Gene families : OG0001047 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001047_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g15729

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00036p00235910 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00099p00056810 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
Als_g13995 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g08425 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g02902 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g72516 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g78248 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g06078 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01036378001 No alias No description available 0.02 OrthoFinder output from all 47 species
LOC_Os02g13130.1 LOC_Os02g13130 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os08g01930.1 LOC_Os08g01930 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_13061g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Nbi_g17013 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g18992 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g19200 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g63768 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc11g040370.2.1 Solyc11g040370 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc12g095960.3.1 Solyc12g095960 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e021868_P005 Zm00001e021868 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001510 RNA methylation IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0009452 7-methylguanosine RNA capping IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0036260 RNA capping IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR004088 KH_dom_type_1 111 175
IPR004088 KH_dom_type_1 197 266
No external refs found!