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  5. Sam_g15690

Sam_g15690


Description : EC_4.4 carbon-sulfur lyase & original description: none


Gene families : OG0000726 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000726_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g15690

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00109p00140320 evm_27.TU.AmTr_v1... Cellular respiration.glycolysis.methylglyoxal... 0.02 OrthoFinder output from all 47 species
Als_g04909 No alias EC_4.4 carbon-sulfur lyase & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g02896 No alias EC_4.4 carbon-sulfur lyase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g15267 No alias EC_4.4 carbon-sulfur lyase & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01015339001 No alias Cellular respiration.glycolysis.methylglyoxal... 0.02 OrthoFinder output from all 47 species
LOC_Os02g17920.1 LOC_Os02g17920 lactoyl-glutathione lyase (GLX1) 0.02 OrthoFinder output from all 47 species
Len_g16182 No alias EC_4.4 carbon-sulfur lyase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g12387 No alias EC_4.4 carbon-sulfur lyase & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g05707 No alias EC_4.4 carbon-sulfur lyase & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0016.g006905 No alias EC_4.4 carbon-sulfur lyase & original description: CDS=228-1280 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0151.g023440 No alias not classified & original description: CDS=1-510 0.03 OrthoFinder output from all 47 species
Spa_g53658 No alias EC_4.4 carbon-sulfur lyase & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity IEP HCCA
MF GO:0004177 aminopeptidase activity IEP HCCA
BP GO:0006528 asparagine metabolic process IEP HCCA
BP GO:0006529 asparagine biosynthetic process IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009066 aspartate family amino acid metabolic process IEP HCCA
BP GO:0009067 aspartate family amino acid biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR004360 Glyas_Fos-R_dOase_dom 95 210
No external refs found!