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  5. Sam_g15646

Sam_g15646


Description : EC_4.1 carbon-carbon lyase & original description: none


Gene families : OG0000934 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000934_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g15646

Target Alias Description ECC score Gene Family Method Actions
Aop_g02173 AUD1, UXS2, ATUXS2 EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g17249 UXS5 EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01025597001 UXS1, ATUXS1 Carbohydrate metabolism.nucleotide sugar... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0016.g006940 UXS6 EC_4.1 carbon-carbon lyase & original description: CDS=142-1230 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0007034 vacuolar transport IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
InterPro domains Description Start Stop
IPR016040 NAD(P)-bd_dom 120 413
No external refs found!