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  5. Sam_g15471

Sam_g15471


Description : component *(eEF1B-beta/-delta) of eEF1B eEF1A-GDP-recycling complex & original description: none


Gene families : OG0001031 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001031_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g15471
Cluster HCCA: Cluster_78

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00211240 evm_27.TU.AmTr_v1... Protein biosynthesis.translation elongation.eEF1B... 0.02 OrthoFinder output from all 47 species
AT5G19510 No alias Translation elongation factor EF1B/ribosomal protein S6... 0.05 OrthoFinder output from all 47 species
Adi_g127458 No alias component *(eEF1B-beta/-delta) of eEF1B... 0.03 OrthoFinder output from all 47 species
Aop_g00342 No alias component *(eEF1B-beta/-delta) of eEF1B... 0.03 OrthoFinder output from all 47 species
Aop_g17687 No alias component *(eEF1B-beta/-delta) of eEF1B... 0.04 OrthoFinder output from all 47 species
Ceric.23G080700.1 Ceric.23G080700 component *(eEF1B-beta/-delta) of eEF1B... 0.03 OrthoFinder output from all 47 species
Ceric.32G024000.1 Ceric.32G024000 component *(eEF1B-beta/-delta) of eEF1B... 0.03 OrthoFinder output from all 47 species
Dac_g26124 No alias component *(eEF1B-beta/-delta) of eEF1B... 0.03 OrthoFinder output from all 47 species
Ehy_g30815 No alias component *(eEF1B-beta/-delta) of eEF1B... 0.02 OrthoFinder output from all 47 species
GSVIVT01037374001 No alias Protein biosynthesis.translation elongation.eEF1B... 0.03 OrthoFinder output from all 47 species
Gb_07694 No alias component eEF1B-beta/-delta of eEF1B eEF1A-GDP-recycling complex 0.03 OrthoFinder output from all 47 species
LOC_Os07g46750.1 LOC_Os07g46750 component eEF1B-beta/-delta of eEF1B eEF1A-GDP-recycling complex 0.03 OrthoFinder output from all 47 species
MA_102713g0020 No alias component eEF1B-beta/-delta of eEF1B eEF1A-GDP-recycling complex 0.03 OrthoFinder output from all 47 species
Mp8g01660.1 No alias component eEF1B-beta/-delta of eEF1B eEF1A-GDP-recycling complex 0.03 OrthoFinder output from all 47 species
Ppi_g04220 No alias component *(eEF1B-beta/-delta) of eEF1B... 0.03 OrthoFinder output from all 47 species
Ppi_g23475 No alias component *(eEF1B-beta/-delta) of eEF1B... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000173 No alias component *(eEF1B-beta/-delta) of eEF1B... 0.03 OrthoFinder output from all 47 species
Sam_g12733 No alias component *(eEF1B-beta/-delta) of eEF1B... 0.04 OrthoFinder output from all 47 species
Sam_g17349 No alias component *(eEF1B-beta/-delta) of eEF1B... 0.05 OrthoFinder output from all 47 species
Sam_g24070 No alias component *(eEF1B-beta/-delta) of eEF1B... 0.04 OrthoFinder output from all 47 species
Sam_g31515 No alias component *(eEF1B-beta/-delta) of eEF1B... 0.03 OrthoFinder output from all 47 species
Sam_g47309 No alias component *(eEF1B-beta/-delta) of eEF1B... 0.03 OrthoFinder output from all 47 species
Sam_g47970 No alias component *(eEF1B-beta/-delta) of eEF1B... 0.05 OrthoFinder output from all 47 species
Sam_g48036 No alias component *(eEF1B-beta/-delta) of eEF1B... 0.03 OrthoFinder output from all 47 species
Sam_g49094 No alias component *(eEF1B-beta/-delta) of eEF1B... 0.04 OrthoFinder output from all 47 species
Solyc01g098000.3.1 Solyc01g098000 component eEF1B-beta/-delta of eEF1B eEF1A-GDP-recycling complex 0.04 OrthoFinder output from all 47 species
Solyc07g016150.4.1 Solyc07g016150 component eEF1B-beta/-delta of eEF1B eEF1A-GDP-recycling complex 0.03 OrthoFinder output from all 47 species
Solyc11g072190.2.1 Solyc11g072190 component eEF1B-beta/-delta of eEF1B eEF1A-GDP-recycling complex 0.04 OrthoFinder output from all 47 species
Spa_g07922 No alias component *(eEF1B-beta/-delta) of eEF1B... 0.03 OrthoFinder output from all 47 species
Spa_g07923 No alias component *(eEF1B-beta/-delta) of eEF1B... 0.04 OrthoFinder output from all 47 species
Spa_g12874 No alias component *(eEF1B-beta/-delta) of eEF1B... 0.05 OrthoFinder output from all 47 species
Spa_g21700 No alias component *(eEF1B-beta/-delta) of eEF1B... 0.03 OrthoFinder output from all 47 species
Spa_g39960 No alias component *(eEF1B-beta/-delta) of eEF1B... 0.03 OrthoFinder output from all 47 species
Tin_g21340 No alias component *(eEF1B-beta/-delta) of eEF1B... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003746 translation elongation factor activity IEA Interproscan
BP GO:0006414 translational elongation IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0003714 transcription corepressor activity IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004181 metallocarboxypeptidase activity IEP HCCA
MF GO:0004478 methionine adenosyltransferase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005740 mitochondrial envelope IEP HCCA
CC GO:0005751 mitochondrial respiratory chain complex IV IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006123 mitochondrial electron transport, cytochrome c to oxygen IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0007155 cell adhesion IEP HCCA
BP GO:0007160 cell-matrix adhesion IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008235 metalloexopeptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
BP GO:0009060 aerobic respiration IEP HCCA
BP GO:0015980 energy derivation by oxidation of organic compounds IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0019646 aerobic electron transport chain IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
BP GO:0022904 respiratory electron transport chain IEP HCCA
BP GO:0031589 cell-substrate adhesion IEP HCCA
CC GO:0031967 organelle envelope IEP HCCA
CC GO:0031975 envelope IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
CC GO:0045277 respiratory chain complex IV IEP HCCA
BP GO:0045333 cellular respiration IEP HCCA
BP GO:0046500 S-adenosylmethionine metabolic process IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
CC GO:0070069 cytochrome complex IEP HCCA
CC GO:0098803 respiratory chain complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR014038 EF1B_bsu/dsu_GNE 172 255
No external refs found!