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  5. Sam_g15283

Sam_g15283


Description : F-type thioredoxin *(Trx-F) & original description: none


Gene families : OG0001099 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001099_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g15283

Target Alias Description ECC score Gene Family Method Actions
Adi_g003203 TRXF2, ATF2 F-type thioredoxin *(Trx-F) & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g079287 ATF1, TRXF1 F-type thioredoxin *(Trx-F) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g06364 TRXF2, ATF2 F-type thioredoxin *(Trx-F) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0388.g067618 TRXF2, ATF2 F-type thioredoxin *(Trx-F) & original description: CDS=462-1067 0.03 OrthoFinder output from all 47 species
Cba_g39158 ATF1, TRXF1 F-type thioredoxin *(Trx-F) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g04258 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os01g68480.1 TRXF2, ATF2,... F-type thioredoxin 0.02 OrthoFinder output from all 47 species
Len_g21742 TRXF2, ATF2 F-type thioredoxin *(Trx-F) & original description: none 0.02 OrthoFinder output from all 47 species
Len_g25692 TRXF2, ATF2 F-type thioredoxin *(Trx-F) & original description: none 0.04 OrthoFinder output from all 47 species
Len_g30428 TRXF2, ATF2 F-type thioredoxin *(Trx-F) & original description: none 0.02 OrthoFinder output from all 47 species
MA_5229g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ore_g14018 ATF1, TRXF1 F-type thioredoxin *(Trx-F) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g30576 TRXF2, ATF2 F-type thioredoxin *(Trx-F) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g32202 ATF1, TRXF1 F-type thioredoxin *(Trx-F) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0059.g015100 TRXF2, ATF2 F-type thioredoxin *(Trx-F) & original description: CDS=110-658 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0134.g022310 ATF1, TRXF1 F-type thioredoxin *(Trx-F) & original description: CDS=118-813 0.03 OrthoFinder output from all 47 species
Sam_g38377 No alias F-type thioredoxin *(Trx-F) & original description: none 0.06 OrthoFinder output from all 47 species
Smo77812 ATH5, ATTRX5, TRX5, LIV1 No description available 0.03 OrthoFinder output from all 47 species
Solyc05g056300.4.1 ATF1, TRXF1,... F-type thioredoxin 0.02 OrthoFinder output from all 47 species
Zm00001e040421_P002 TRXF2, ATF2,... F-type thioredoxin 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004089 carbonate dehydratase activity IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0004645 1,4-alpha-oligoglucan phosphorylase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0008184 glycogen phosphorylase activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
InterPro domains Description Start Stop
IPR013766 Thioredoxin_domain 89 188
No external refs found!