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  5. Sam_g15253

Sam_g15253


Description : not classified & original description: none


Gene families : OG0001424 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001424_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g15253

Target Alias Description ECC score Gene Family Method Actions
AT4G08510 No alias unknown protein; LOCATED IN: chloroplast; BEST... 0.02 OrthoFinder output from all 47 species
Adi_g056270 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g081389 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g109484 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01029687001 No alias No description available 0.02 OrthoFinder output from all 47 species
Lfl_g09922 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp1g04810.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ore_g41023 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g104480.4.1 Solyc01g104480 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Spa_g07624 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006914 autophagy IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
CC GO:0031011 Ino80 complex IEP HCCA
MF GO:0032182 ubiquitin-like protein binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043130 ubiquitin binding IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP HCCA
BP GO:0061919 process utilizing autophagic mechanism IEP HCCA
CC GO:0070603 SWI/SNF superfamily-type complex IEP HCCA
CC GO:0097346 INO80-type complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1902554 serine/threonine protein kinase complex IEP HCCA
CC GO:1902911 protein kinase complex IEP HCCA
CC GO:1904949 ATPase complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
CC GO:1990316 Atg1/ULK1 kinase complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!