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Description : plastidial RNA splicing factor *(HPE1) & original description: none
Gene families : OG0007581 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007581_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Sam_g15062 | |
| Cluster | HCCA: Cluster_26 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G70200 | No alias | RNA-binding (RRM/RBD/RNP motifs) family protein | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0052.g031623 | No alias | plastidial RNA splicing factor *(HPE1) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.04G006400.1 | Ceric.04G006400 | plastidial RNA splicing factor *(HPE1) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g11586 | No alias | plastidial RNA splicing factor *(HPE1) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g26366 | No alias | plastidial RNA splicing factor *(HPE1) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g01458 | No alias | plastidial RNA splicing factor *(HPE1) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g01582 | No alias | plastidial RNA splicing factor *(HPE1) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g24330 | No alias | plastidial RNA splicing factor *(HPE1) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g06305 | No alias | plastidial RNA splicing factor *(HPE1) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0062.g015456 | No alias | plastidial RNA splicing factor *(HPE1) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc05g006070.4.1 | Solyc05g006070 | HPE1 plastidial RNA splicing factor | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e013842_P001 | Zm00001e013842 | HPE1 plastidial RNA splicing factor | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | HCCA |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | HCCA |
| MF | GO:0016830 | carbon-carbon lyase activity | IEP | HCCA |
| MF | GO:0016859 | cis-trans isomerase activity | IEP | HCCA |
| MF | GO:0019842 | vitamin binding | IEP | HCCA |
| MF | GO:0030170 | pyridoxal phosphate binding | IEP | HCCA |
| MF | GO:0070279 | vitamin B6 binding | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |