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  5. Sam_g14921

Sam_g14921


Description : component *(XRCC3) of RAD51c-XRCC3 accessory DSB repair heterodimer & original description: none


Gene families : OG0001716 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001716_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g14921

Target Alias Description ECC score Gene Family Method Actions
Ala_g23150 RAD51, ATRAD51 component *(RAD51) of BRCC regulatory deubiquination... 0.03 OrthoFinder output from all 47 species
Aspi01Gene38719.t1 XRCC3, ATXRCC3,... component *(XRCC3) of RAD51c-XRCC3 accessory DSB repair... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000870.37 RAD51, ATRAD51 DNA damage response.BRCC DNA-damage response... 0.01 OrthoFinder output from all 47 species
Lfl_g18325 XRCC3, ATXRCC3 component *(XRCC3) of RAD51c-XRCC3 accessory DSB repair... 0.03 OrthoFinder output from all 47 species
Nbi_g04179 RAD51, ATRAD51 component *(RAD51) of BRCC regulatory deubiquination... 0.02 OrthoFinder output from all 47 species
Pnu_g32942 XRCC3, ATXRCC3 component *(XRCC3) of RAD51c-XRCC3 accessory DSB repair... 0.02 OrthoFinder output from all 47 species
Ppi_g02833 RAD51, ATRAD51 component *(RAD51) of BRCC regulatory deubiquination... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000652 ARLIM15, DMC1, ATDMC1 not classified & original description: CDS=1-1248 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0019.g007848 RAD51, ATRAD51 component *(RAD51) of BRCC regulatory deubiquination... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0118.g021196 XRCC3, ATXRCC3 component *(XRCC3) of RAD51c-XRCC3 accessory DSB repair... 0.04 OrthoFinder output from all 47 species
Tin_g05894 RAD51, ATRAD51 component *(RAD51) of BRCC regulatory deubiquination... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR013632 DNA_recomb/repair_Rad51_C 25 277
No external refs found!