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  5. Sam_g14790

Sam_g14790


Description : substrate-to-CDC48 bridging factor *(PUX3/4/5) & original description: none


Gene families : OG0003606 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003606_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g14790

Target Alias Description ECC score Gene Family Method Actions
Aop_g01672 PUX4 substrate-to-CDC48 bridging factor *(PUX3/4/5) &... 0.02 OrthoFinder output from all 47 species
Msp_g24993 PUX4 substrate-to-CDC48 bridging factor *(PUX3/4/5) &... 0.03 OrthoFinder output from all 47 species
Solyc07g049260.4.1 PUX5, Solyc07g049260 Plant UBX domain-containing protein 4 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0005484 SNAP receptor activity IEP HCCA
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0030674 protein-macromolecule adaptor activity IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
MF GO:0060090 molecular adaptor activity IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
InterPro domains Description Start Stop
IPR012989 SEP_domain 288 361
IPR001012 UBX_dom 393 470
No external refs found!