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  5. Sam_g14746

Sam_g14746


Description : circadian clock time-of-day-dependent expressed repressor *(PRR) & original description: none


Gene families : OG0001140 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001140_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g14746

Target Alias Description ECC score Gene Family Method Actions
Ceric.04G018800.1 APRR7, PRR7,... circadian clock time-of-day-dependent expressed... 0.09 OrthoFinder output from all 47 species
Ceric.24G072900.1 APRR5, PRR5,... circadian clock time-of-day-dependent expressed... 0.05 OrthoFinder output from all 47 species
Ehy_g07886 APRR7, PRR7 circadian clock time-of-day-dependent expressed... 0.03 OrthoFinder output from all 47 species
LOC_Os09g36220.1 APRR5, PRR5,... PRR circadian clock time-of-day-dependent expressed repressor 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004329 formate-tetrahydrofolate ligase activity IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR010402 CCT_domain 839 881
IPR001789 Sig_transdc_resp-reg_receiver 176 288
No external refs found!