Sam_g14494

Description : component *(eL32) of large ribosomal-subunit (LSU) proteome & original description: none

Gene families : OG0001000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001000_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sam_g14494
Cluster	HCCA: Cluster_10

Target	Alias	Description	ECC score	Gene Family Method
AT4G18100	No alias	Ribosomal protein L32e	0.06	OrthoFinder output from all 47 species
AT5G46430	No alias	Ribosomal protein L32e	0.04	OrthoFinder output from all 47 species
Adi_g018844	No alias	component *(eL32) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Adi_g030118	No alias	component *(eL32) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Ala_g32062	No alias	component *(eL32) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Als_g24582	No alias	component *(eL32) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Aop_g00898	No alias	component *(eL32) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Azfi_s0030.g024411	No alias	component *(eL32) of large ribosomal-subunit (LSU)...	0.06	OrthoFinder output from all 47 species
Azfi_s0061.g035078	No alias	component *(eL32) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Ceric.22G081000.1	Ceric.22G081000	component *(eL32) of large ribosomal-subunit (LSU)...	0.1	OrthoFinder output from all 47 species
Ceric.39G032400.1	Ceric.39G032400	component *(eL32) of large ribosomal-subunit (LSU)...	0.05	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00020554.140	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.09	OrthoFinder output from all 47 species
Cre06.g289550	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.09	OrthoFinder output from all 47 species
Dac_g04434	No alias	component *(eL32) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Dac_g18095	No alias	component *(eL32) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Dcu_g24494	No alias	component *(eL32) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Dcu_g35048	No alias	component *(eL32) of large ribosomal-subunit (LSU)...	0.07	OrthoFinder output from all 47 species
Dcu_g35080	No alias	component *(eL32) of large ribosomal-subunit (LSU)...	0.05	OrthoFinder output from all 47 species
Dde_g04107	No alias	component *(eL32) of large ribosomal-subunit (LSU)...	0.05	OrthoFinder output from all 47 species
Ehy_g18228	No alias	component *(eL32) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
GSVIVT01005150001	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.04	OrthoFinder output from all 47 species
GSVIVT01021377001	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.1	OrthoFinder output from all 47 species
Gb_36437	No alias	component RPL32 of LSU proteome component	0.06	OrthoFinder output from all 47 species
LOC_Os08g41300.1	LOC_Os08g41300	component RPL32 of LSU proteome component	0.04	OrthoFinder output from all 47 species
LOC_Os09g32500.1	LOC_Os09g32500	component RPL32 of LSU proteome component	0.12	OrthoFinder output from all 47 species
Lfl_g14525	No alias	component *(eL32) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
MA_10434621g0010	No alias	component RPL32 of LSU proteome component	0.03	OrthoFinder output from all 47 species
MA_41569g0010	No alias	component RPL32 of LSU proteome component	0.08	OrthoFinder output from all 47 species
Mp7g12480.1	No alias	component RPL32 of LSU proteome component	0.03	OrthoFinder output from all 47 species
Msp_g02643	No alias	component *(eL32) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Msp_g34354	No alias	component *(eL32) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Msp_g35436	No alias	component *(eL32) of large ribosomal-subunit (LSU)...	0.06	OrthoFinder output from all 47 species
Nbi_g10779	No alias	component *(eL32) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Nbi_g45103	No alias	component *(eL32) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Ore_g41192	No alias	component *(eL32) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Pp3c14_10580V3.1	Pp3c14_10580	Ribosomal protein L32e	0.01	OrthoFinder output from all 47 species
Pp3c1_32490V3.1	Pp3c1_32490	Ribosomal protein L32e	0.04	OrthoFinder output from all 47 species
Pp3c2_9590V3.1	Pp3c2_9590	Ribosomal protein L32e	0.04	OrthoFinder output from all 47 species
Ppi_g20685	No alias	component *(eL32) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Ppi_g32999	No alias	component *(eL32) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Sam_g12910	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Sam_g30727	No alias	component *(eL32) of large ribosomal-subunit (LSU)...	0.1	OrthoFinder output from all 47 species
Sam_g30905	No alias	component *(eL32) of large ribosomal-subunit (LSU)...	0.08	OrthoFinder output from all 47 species
Sam_g39443	No alias	component *(eL32) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Smo146656	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.04	OrthoFinder output from all 47 species
Solyc02g070310.3.1	Solyc02g070310	component RPL32 of LSU proteome component	0.07	OrthoFinder output from all 47 species
Solyc02g150130.1.1	Solyc02g150130	component RPL32 of LSU proteome component	0.03	OrthoFinder output from all 47 species
Solyc08g006900.3.1	Solyc08g006900	component RPL32 of LSU proteome component	0.08	OrthoFinder output from all 47 species
Spa_g11641	No alias	component *(eL32) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Spa_g17123	No alias	component *(eL32) of large ribosomal-subunit (LSU)...	0.05	OrthoFinder output from all 47 species
Spa_g21119	No alias	component *(eL32) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Spa_g41176	No alias	component *(eL32) of large ribosomal-subunit (LSU)...	0.06	OrthoFinder output from all 47 species
Zm00001e003623_P002	Zm00001e003623	component RPL32 of LSU proteome component	0.03	OrthoFinder output from all 47 species
Zm00001e010105_P002	Zm00001e010105	component RPL32 of LSU proteome component	0.03	OrthoFinder output from all 47 species
Zm00001e021938_P001	Zm00001e021938	component RPL32 of LSU proteome component	0.09	OrthoFinder output from all 47 species
Zm00001e034604_P001	Zm00001e034604	component RPL32 of LSU proteome component	0.05	OrthoFinder output from all 47 species
Zm00001e034606_P001	Zm00001e034606	component RPL32 of LSU proteome component	0.08	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003723	RNA binding	IEP	HCCA
MF	GO:0003746	translation elongation factor activity	IEP	HCCA
BP	GO:0006414	translational elongation	IEP	HCCA
MF	GO:0008097	5S rRNA binding	IEP	HCCA
MF	GO:0009678	pyrophosphate hydrolysis-driven proton transmembrane transporter activity	IEP	HCCA
CC	GO:0016469	proton-transporting two-sector ATPase complex	IEP	HCCA
CC	GO:0016471	vacuolar proton-transporting V-type ATPase complex	IEP	HCCA
MF	GO:0019829	ATPase-coupled monoatomic cation transmembrane transporter activity	IEP	HCCA
MF	GO:0019843	rRNA binding	IEP	HCCA
MF	GO:0022853	active monoatomic ion transmembrane transporter activity	IEP	HCCA
CC	GO:0033176	proton-transporting V-type ATPase complex	IEP	HCCA
BP	GO:0034220	monoatomic ion transmembrane transport	IEP	HCCA
MF	GO:0042625	ATPase-coupled ion transmembrane transporter activity	IEP	HCCA
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	IEP	HCCA
MF	GO:0044769	ATPase activity, coupled to transmembrane movement of ions, rotational mechanism	IEP	HCCA
MF	GO:0046961	proton-transporting ATPase activity, rotational mechanism	IEP	HCCA
BP	GO:0098655	monoatomic cation transmembrane transport	IEP	HCCA
BP	GO:0098660	inorganic ion transmembrane transport	IEP	HCCA
BP	GO:0098662	inorganic cation transmembrane transport	IEP	HCCA
BP	GO:1902600	proton transmembrane transport	IEP	HCCA
CC	GO:1904949	ATPase complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001515	Ribosomal_L32e	18	124

External Links

No external refs found!

Sam_g14494

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation