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  5. Sam_g14488

Sam_g14488


Description : LIM-type transcription factor & original description: none


Gene families : OG0000440 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000440_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g14488

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00199510 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.LIM... 0.01 OrthoFinder output from all 47 species
AT1G01780 No alias GATA type zinc finger transcription factor family protein 0.04 OrthoFinder output from all 47 species
Adi_g004397 WLIM1 LIM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g21872 WLIM1 LIM-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g38003 WLIM1 LIM-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g65927 No alias LIM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g21255 WLIM1 LIM-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g03006 WLIM1 LIM-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g16712 WLIM1 LIM-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001741 WLIM1 LIM-type transcription factor & original description: CDS=1-612 0.02 OrthoFinder output from all 47 species
Solyc01g094320.3.1 Solyc01g094320 transcription factor (LIM) 0.02 OrthoFinder output from all 47 species
Solyc08g007940.4.1 Solyc08g007940 transcription factor (LIM) 0.02 OrthoFinder output from all 47 species
Solyc08g080740.3.1 Solyc08g080740 transcription factor (LIM) 0.02 OrthoFinder output from all 47 species
Solyc11g044740.2.1 WLIM1, Solyc11g044740 transcription factor (LIM) 0.03 OrthoFinder output from all 47 species
Spa_g52368 WLIM1 LIM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e023098_P001 Zm00001e023098 transcription factor (LIM) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001781 Znf_LIM 122 177
IPR001781 Znf_LIM 10 67
No external refs found!