Sam_g14462


Description : not classified & original description: none


Gene families : OG0003485 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003485_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g14462

Target Alias Description ECC score Gene Family Method Actions
Adi_g011566 ATH-A, CESA2, ATCESA2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g016782 CESA6, PRC1, IXR2, E112 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g060175 ATH-A, CESA2, ATCESA2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g084101 CESA6, PRC1, IXR2, E112 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g084102 CESA6, PRC1, IXR2, E112 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g086873 CESA6, PRC1, IXR2, E112 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g086874 ATH-A, CESA2, ATCESA2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g096899 CESA6, PRC1, IXR2, E112 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g117094 ATH-A, CESA2, ATCESA2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g33358 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g42653 CESA6, PRC1, IXR2, E112 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g63205 CESA6, PRC1, IXR2, E112 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g63206 CESA6, PRC1, IXR2, E112 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g75768 MUR10, ATCESA7,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g21506 AtCESA1, RSW1, CESA1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10435639g0010 ATH-A, CESA2, ATCESA2 Probable cellulose synthase A catalytic subunit 5... 0.04 OrthoFinder output from all 47 species
Ore_g03533 CESA6, PRC1, IXR2, E112 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g18052 CESA6, PRC1, IXR2, E112 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g25696 ATH-A, CESA2, ATCESA2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g12907 ATH-A, CESA2, ATCESA2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g19601 CESA6, PRC1, IXR2, E112 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g27806 MUR10, ATCESA7,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0092.g018941 AtCESA1, RSW1, CESA1 not classified & original description: CDS=272-652 0.02 OrthoFinder output from all 47 species
Sam_g36084 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g17563 CESA6, PRC1, IXR2, E112 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g17564 CESA6, PRC1, IXR2, E112 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g22139 CESA5 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g22692 AtCESA1, RSW1, CESA1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g38394 ATH-A, CESA2, ATCESA2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g57352 ATH-A, CESA2, ATCESA2 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0016760 cellulose synthase (UDP-forming) activity IEA Interproscan
BP GO:0030244 cellulose biosynthetic process IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0008037 cell recognition IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
InterPro domains Description Start Stop
IPR005150 Cellulose_synth 340 423
IPR027934 CES_Znf_RING 8 78
No external refs found!