AMTR_s00029p00088380 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00029.80

Description : Probable metal-nicotianamine transporter YSL5 OS=Arabidopsis thaliana


Gene families : OG_01_0000193 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000193_tree ,
OG_02_0010100 (LandPlants) Phylogenetic Tree(s): OG_02_0010100_tree ,
OG_03_0010148 (SeedPlants) Phylogenetic Tree(s): OG_03_0010148_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00029p00088380
Cluster HCCA: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
AT4G24120 ATYSL1, YSL1 YELLOW STRIPE like 1 0.02 Archaeplastida
GSVIVT01012035001 No alias Nutrient uptake.iron uptake.chelation-based strategy... 0.04 Archaeplastida
GSVIVT01019646001 No alias Nutrient uptake.iron uptake.chelation-based strategy... 0.04 Archaeplastida
GSVIVT01029329001 No alias Nutrient uptake.iron uptake.chelation-based strategy... 0.04 Archaeplastida
GSVIVT01029349001 No alias Nutrient uptake.iron uptake.chelation-based strategy... 0.03 Archaeplastida
LOC_Os02g42220.1 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.03 Archaeplastida
LOC_Os04g45900.1 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.03 Archaeplastida
LOC_Os05g16290.1 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.02 Archaeplastida
MA_10433264g0010 No alias Probable metal-nicotianamine transporter YSL12 OS=Oryza... 0.04 Archaeplastida
MA_110581g0010 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.03 Archaeplastida
MA_5416460g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
Solyc09g074960.1.1 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.02 Archaeplastida
Zm00001e007544_P001 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.03 Archaeplastida
Zm00001e023053_P001 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.06 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0055085 transmembrane transport IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR004813 OPT 44 118
No external refs found!