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  5. Sam_g14405

Sam_g14405


Description : protein involved in PS-II assembly *(LPA1) & original description: none


Gene families : OG0007503 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007503_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g14405

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00200960 LPA1,... Photosynthesis.photophosphorylation.photosystem... 0.03 OrthoFinder output from all 47 species
Aev_g09161 LPA1 protein involved in PS-II assembly *(LPA1) & original... 0.02 OrthoFinder output from all 47 species
Azfi_s0301.g063734 LPA1 protein involved in PS-II assembly *(LPA1) & original... 0.02 OrthoFinder output from all 47 species
Ceric.1Z061600.1 LPA1, Ceric.1Z061600 protein involved in PS-II assembly *(LPA1) & original... 0.05 OrthoFinder output from all 47 species
Cre10.g430150 No alias Photosynthesis.photophosphorylation.photosystem... 0.01 OrthoFinder output from all 47 species
GSVIVT01027972001 LPA1 Photosynthesis.photophosphorylation.photosystem... 0.02 OrthoFinder output from all 47 species
LOC_Os01g25600.1 LPA1, LOC_Os01g25600 LPA1 protein involved in PS-II assembly 0.03 OrthoFinder output from all 47 species
Lfl_g03930 LPA1 protein involved in PS-II assembly *(LPA1) & original... 0.05 OrthoFinder output from all 47 species
MA_10428940g0010 LPA1 Protein LOW PSII ACCUMULATION 1, chloroplastic... 0.02 OrthoFinder output from all 47 species
Ore_g20376 LPA1 protein involved in PS-II assembly *(LPA1) & original... 0.02 OrthoFinder output from all 47 species
Pnu_g08072 LPA1 protein involved in PS-II assembly *(LPA1) & original... 0.04 OrthoFinder output from all 47 species
Ppi_g33137 LPA1 protein involved in PS-II assembly *(LPA1) & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0080.g017935 LPA1 protein involved in PS-II assembly *(LPA1) & original... 0.03 OrthoFinder output from all 47 species
Tin_g06564 LPA1 protein involved in PS-II assembly *(LPA1) & original... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
BP GO:0009314 response to radiation IEP HCCA
BP GO:0009416 response to light stimulus IEP HCCA
BP GO:0009581 detection of external stimulus IEP HCCA
BP GO:0009582 detection of abiotic stimulus IEP HCCA
BP GO:0009583 detection of light stimulus IEP HCCA
BP GO:0009584 detection of visible light IEP HCCA
BP GO:0009605 response to external stimulus IEP HCCA
BP GO:0009628 response to abiotic stimulus IEP HCCA
MF GO:0009916 alternative oxidase activity IEP HCCA
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP HCCA
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051606 detection of stimulus IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
InterPro domains Description Start Stop
IPR021883 LPA1-like 170 246
No external refs found!