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  5. Sam_g14397

Sam_g14397


Description : EC_6.1 ligase forming carbon-oxygen bond & original description: none


Gene families : OG0001747 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001747_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g14397

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00025770 ATNS1, NS1,... Protein biosynthesis.aminoacyl-tRNA synthetase... 0.04 OrthoFinder output from all 47 species
Adi_g023016 ATNS1, NS1, OVA8 EC_6.1 ligase forming carbon-oxygen bond & original... 0.03 OrthoFinder output from all 47 species
Ala_g05395 ATNS1, NS1, OVA8 EC_6.1 ligase forming carbon-oxygen bond & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene16370.t1 ATNS1, NS1,... EC_6.1 ligase forming carbon-oxygen bond & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene57803.t1 ATNS1, NS1,... EC_6.1 ligase forming carbon-oxygen bond & original... 0.03 OrthoFinder output from all 47 species
Ceric.33G014700.1 ATNS1, NS1,... EC_6.1 ligase forming carbon-oxygen bond & original... 0.02 OrthoFinder output from all 47 species
Dcu_g51580 ATNS1, NS1, OVA8 EC_6.1 ligase forming carbon-oxygen bond & original... 0.05 OrthoFinder output from all 47 species
Ehy_g19094 ATNS1, NS1, OVA8 EC_6.1 ligase forming carbon-oxygen bond & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01004706001 ATNS1, NS1, OVA8 Protein biosynthesis.aminoacyl-tRNA synthetase... 0.02 OrthoFinder output from all 47 species
LOC_Os07g30200.1 ATNS1, NS1,... asparagine-tRNA ligase 0.03 OrthoFinder output from all 47 species
Lfl_g14374 ATNS1, NS1, OVA8 EC_6.1 ligase forming carbon-oxygen bond & original... 0.02 OrthoFinder output from all 47 species
Mp6g15140.1 ATNS1, NS1, OVA8 asparagine-tRNA ligase 0.02 OrthoFinder output from all 47 species
Msp_g26463 ATNS1, NS1, OVA8 EC_6.1 ligase forming carbon-oxygen bond & original... 0.02 OrthoFinder output from all 47 species
Nbi_g30040 ATNS1, NS1, OVA8 EC_6.1 ligase forming carbon-oxygen bond & original... 0.02 OrthoFinder output from all 47 species
Ore_g34153 ATNS1, NS1, OVA8 EC_6.1 ligase forming carbon-oxygen bond & original... 0.03 OrthoFinder output from all 47 species
Pir_g65377 ATNS1, NS1, OVA8 EC_6.1 ligase forming carbon-oxygen bond & original... 0.02 OrthoFinder output from all 47 species
Ppi_g59282 ATNS1, NS1, OVA8 EC_6.1 ligase forming carbon-oxygen bond & original... 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0024.g009068 SYNC1 ARATH,... EC_6.1 ligase forming carbon-oxygen bond & original... 0.02 OrthoFinder output from all 47 species
Sam_g39305 No alias EC_6.1 ligase forming carbon-oxygen bond & original... 0.02 OrthoFinder output from all 47 species
Tin_g08542 ATNS1, NS1, OVA8 EC_6.1 ligase forming carbon-oxygen bond & original... 0.03 OrthoFinder output from all 47 species
Zm00001e010372_P004 ATNS1, NS1,... asparagine-tRNA ligase 0.03 OrthoFinder output from all 47 species
Zm00001e034992_P001 ATNS1, NS1,... asparagine-tRNA ligase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003747 translation release factor activity IEP HCCA
BP GO:0006066 alcohol metabolic process IEP HCCA
BP GO:0006415 translational termination IEP HCCA
BP GO:0006729 tetrahydrobiopterin biosynthetic process IEP HCCA
MF GO:0008079 translation termination factor activity IEP HCCA
MF GO:0008124 4-alpha-hydroxytetrahydrobiopterin dehydratase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016881 acid-amino acid ligase activity IEP HCCA
BP GO:0019751 polyol metabolic process IEP HCCA
BP GO:0022411 cellular component disassembly IEP HCCA
BP GO:0032984 protein-containing complex disassembly IEP HCCA
BP GO:0034311 diol metabolic process IEP HCCA
BP GO:0034312 diol biosynthetic process IEP HCCA
BP GO:0042558 pteridine-containing compound metabolic process IEP HCCA
BP GO:0042559 pteridine-containing compound biosynthetic process IEP HCCA
BP GO:0046146 tetrahydrobiopterin metabolic process IEP HCCA
BP GO:0046165 alcohol biosynthetic process IEP HCCA
BP GO:0046173 polyol biosynthetic process IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA
BP GO:1901617 organic hydroxy compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR004364 Aa-tRNA-synt_II 210 562
IPR004365 NA-bd_OB_tRNA 114 192
No external refs found!