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  5. Sam_g14395

Sam_g14395


Description : UDP-D-glucuronic acid 4-epimerase & original description: none


Gene families : OG0000504 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000504_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g14395
Cluster HCCA: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00132110 GAE1,... Carbohydrate metabolism.nucleotide sugar... 0.02 OrthoFinder output from all 47 species
AMTR_s00110p00097630 GAE2,... Carbohydrate metabolism.nucleotide sugar... 0.02 OrthoFinder output from all 47 species
AT2G45310 GAE4 UDP-D-glucuronate 4-epimerase 4 0.02 OrthoFinder output from all 47 species
AT3G23820 GAE6 UDP-D-glucuronate 4-epimerase 6 0.02 OrthoFinder output from all 47 species
Aev_g17233 GAE2 UDP-D-glucuronic acid 4-epimerase & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g37564 GAE1 UDP-D-glucuronic acid 4-epimerase & original description: none 0.04 OrthoFinder output from all 47 species
Als_g09457 GAE2 UDP-D-glucuronic acid 4-epimerase & original description: none 0.04 OrthoFinder output from all 47 species
Als_g23117 GAE1 UDP-D-glucuronic acid 4-epimerase & original description: none 0.02 OrthoFinder output from all 47 species
Als_g41575 GAE3 UDP-D-glucuronic acid 4-epimerase & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g07274 GAE2 UDP-D-glucuronic acid 4-epimerase & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g01238 GAE1 UDP-D-glucuronic acid 4-epimerase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g02563 GAE1 UDP-D-glucuronic acid 4-epimerase & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g04214 GAE1 UDP-D-glucuronic acid 4-epimerase & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene29740.t1 GAE1, Aspi01Gene29740 UDP-D-glucuronic acid 4-epimerase & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.27G040000.1 GAE1, Ceric.27G040000 UDP-D-glucuronic acid 4-epimerase & original... 0.02 OrthoFinder output from all 47 species
Dac_g14249 GAE1 UDP-D-glucuronic acid 4-epimerase & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g33060 GAE1 UDP-D-glucuronic acid 4-epimerase & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g15331 GAE1 UDP-D-glucuronic acid 4-epimerase & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g12150 GAE1 UDP-D-glucuronic acid 4-epimerase & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g03704 GAE2 UDP-D-glucuronic acid 4-epimerase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g06758 GAE2 UDP-D-glucuronic acid 4-epimerase & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g07756 GAE1 UDP-D-glucuronic acid 4-epimerase & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g10634 GAE2 UDP-D-glucuronic acid 4-epimerase & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g15156 GAE2 UDP-D-glucuronic acid 4-epimerase & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g23332 GAE2 UDP-D-glucuronic acid 4-epimerase & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01027676001 GAE3 No description available 0.02 OrthoFinder output from all 47 species
Gb_06935 GAE3 UDP-D-glucuronic acid 4-epimerase 0.02 OrthoFinder output from all 47 species
LOC_Os03g14540.1 GAE2, LOC_Os03g14540 UDP-D-glucuronic acid 4-epimerase 0.03 OrthoFinder output from all 47 species
LOC_Os09g32670.1 GAE6, LOC_Os09g32670 UDP-D-glucuronic acid 4-epimerase 0.03 OrthoFinder output from all 47 species
Lfl_g01600 GAE1 UDP-D-glucuronic acid 4-epimerase & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g04552 GAE1 UDP-D-glucuronic acid 4-epimerase & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g36467 GAE1 UDP-D-glucuronic acid 4-epimerase & original description: none 0.05 OrthoFinder output from all 47 species
Mp7g17210.1 GAE1 UDP-D-glucuronic acid 4-epimerase 0.02 OrthoFinder output from all 47 species
Msp_g00568 GAE1 UDP-D-glucuronic acid 4-epimerase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g18487 GAE1 UDP-D-glucuronic acid 4-epimerase & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g38573 GAE1 UDP-D-glucuronic acid 4-epimerase & original description: none 0.07 OrthoFinder output from all 47 species
Pir_g52722 GAE1 UDP-D-glucuronic acid 4-epimerase & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g001061 GAE1 UDP-D-glucuronic acid 4-epimerase & original... 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0008.g003994 GAE2 UDP-D-glucuronic acid 4-epimerase & original... 0.04 OrthoFinder output from all 47 species
Smo89938 GAE3 Carbohydrate metabolism.nucleotide sugar... 0.05 OrthoFinder output from all 47 species
Spa_g06270 GAE1 UDP-D-glucuronic acid 4-epimerase & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g12682 GAE1 UDP-D-glucuronic acid 4-epimerase & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g04641 GAE1 UDP-D-glucuronic acid 4-epimerase & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e038573_P001 GAE2, Zm00001e038573 UDP-D-glucuronic acid 4-epimerase 0.03 OrthoFinder output from all 47 species
Zm00001e042206_P001 GAE2, Zm00001e042206 UDP-D-glucuronic acid 4-epimerase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003871 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008172 S-methyltransferase activity IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
MF GO:0042085 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR016040 NAD(P)-bd_dom 102 421
No external refs found!