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  5. Sam_g14387

Sam_g14387


Description : not classified & original description: none


Gene families : OG0000038 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g14387

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00131340 ESK1, TBL29,... Cell wall.hemicellulose.xylan.modification and... 0.02 OrthoFinder output from all 47 species
AT2G42570 TBL39 TRICHOME BIREFRINGENCE-LIKE 39 0.03 OrthoFinder output from all 47 species
AT3G62390 TBL6 TRICHOME BIREFRINGENCE-LIKE 6 0.05 OrthoFinder output from all 47 species
AT4G11090 TBL23 TRICHOME BIREFRINGENCE-LIKE 23 0.02 OrthoFinder output from all 47 species
AT5G01620 TBL35 TRICHOME BIREFRINGENCE-LIKE 35 0.02 OrthoFinder output from all 47 species
Aev_g06043 TBL10 rhamnogalacturonan-I O-acetyltransferase *(TBL) &... 0.03 OrthoFinder output from all 47 species
Ala_g05795 TBL1 polysaccharide O-acetyltransferase *(TBR) & original... 0.03 OrthoFinder output from all 47 species
Aop_g12377 TBL16 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g15401 TBL16 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.18G035700.1 TBL21, Ceric.18G035700 not classified & original description: pacid=50621838... 0.02 OrthoFinder output from all 47 species
Ceric.18G036100.1 TBL25, Ceric.18G036100 not classified & original description: pacid=50621273... 0.02 OrthoFinder output from all 47 species
Ceric.34G064800.1 YLS7, TBL17,... not classified & original description: pacid=50623042... 0.05 OrthoFinder output from all 47 species
Dcu_g31445 TBL25 not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01014106001 TBL38 Protein trichome birefringence-like 38 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01020160001 TBL27 Cell wall.hemicellulose.xyloglucan.modification and... 0.03 OrthoFinder output from all 47 species
GSVIVT01021192001 TBL38 Protein trichome birefringence-like 38 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
LOC_Os02g02580.1 TBL12, LOC_Os02g02580 Protein trichome birefringence-like 12 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
LOC_Os06g12870.1 TBL27, LOC_Os06g12870 xyloglucan O-acetyltransferase (AXY4) 0.02 OrthoFinder output from all 47 species
MA_441100g0010 PMR5, TBL44 Protein PMR5 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Ppi_g11539 TBL5 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g32282 TBL14 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g50493 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc06g007170.4.1 PMR5, TBL44,... Protein PMR5 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Solyc07g055730.4.1 TBL43, Solyc07g055730 Protein trichome birefringence-like 43 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc10g008030.4.1 TBL39, Solyc10g008030 Protein trichome birefringence-like 38 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc11g006990.2.1 TBL36, Solyc11g006990 Protein trichome birefringence-like 36 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Tin_g40095 TBL5 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e006156_P001 TBL33, Zm00001e006156 xylan O-acetyltransferase (XOAT) 0.02 OrthoFinder output from all 47 species
Zm00001e026898_P004 ESK1, TBL29,... xylan O-acetyltransferase (XOAT) 0.02 OrthoFinder output from all 47 species
Zm00001e030698_P002 TBL38, Zm00001e030698 Protein trichome birefringence-like 38 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e035022_P004 TBL13, Zm00001e035022 Protein trichome birefringence-like 13 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e036803_P001 TBL19, Zm00001e036803 Protein trichome birefringence-like 19 OS=Arabidopsis... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016740 transferase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
InterPro domains Description Start Stop
IPR025846 TBL_N 89 141
IPR026057 PC-Esterase 142 415
No external refs found!