Sam_g14386

Description : not classified & original description: none

Gene families : OG0001693 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001693_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sam_g14386

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00068p00114610	evm_27.TU.AmTr_v1...	RNA processing.organelle machineries.RNA...	0.01	OrthoFinder output from all 47 species
Adi_g064054	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g13402	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.36G064500.1	Ceric.36G064500	not classified & original description: pacid=50568078...	0.02	OrthoFinder output from all 47 species
Len_g12640	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0029.g010066	No alias	not classified & original description: CDS=443-1546	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004045	aminoacyl-tRNA hydrolase activity	IEA	Interproscan
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
MF	GO:0052689	carboxylic ester hydrolase activity	None	Extended
MF	GO:0140098	catalytic activity, acting on RNA	None	Extended
MF	GO:0140101	catalytic activity, acting on a tRNA	None	Extended
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended

Type	GO Term	Name	Evidence	Source
CC	GO:0005667	transcription regulator complex	IEP	HCCA
CC	GO:0005672	transcription factor TFIIA complex	IEP	HCCA
BP	GO:0006352	DNA-templated transcription initiation	IEP	HCCA
BP	GO:0006367	transcription initiation at RNA polymerase II promoter	IEP	HCCA
MF	GO:0009055	electron transfer activity	IEP	HCCA
BP	GO:0009058	biosynthetic process	IEP	HCCA
BP	GO:0032774	RNA biosynthetic process	IEP	HCCA
CC	GO:0090575	RNA polymerase II transcription regulator complex	IEP	HCCA
CC	GO:0140513	nuclear protein-containing complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001328	Pept_tRNA_hydro	34	214

External Links

No external refs found!