AMTR_s00029p00087270 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00029.79

Description : Endoglucanase 5 OS=Arabidopsis thaliana


Gene families : OG_01_0000093 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000093_tree ,
OG_02_0000489 (LandPlants) Phylogenetic Tree(s): OG_02_0000489_tree ,
OG_03_0000356 (SeedPlants) Phylogenetic Tree(s): OG_03_0000356_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00029p00087270
Cluster HCCA: Cluster_173

Target Alias Description ECC score Gene Family Method Actions
Gb_15573 No alias endo-1,4-beta-glucanase 0.04 Archaeplastida
Gb_29204 No alias Endoglucanase 4 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Gb_29209 No alias Endoglucanase 23 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
Gb_34875 No alias Endoglucanase 4 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os05g12150.1 No alias Endoglucanase 15 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
MF GO:0030246 carbohydrate binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR019028 CBM_49 526 604
IPR001701 Glyco_hydro_9 21 483
No external refs found!