Sam_g14110


Description : not classified & original description: none


Gene families : OG0005152 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005152_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g14110

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00182p00053870 evm_27.TU.AmTr_v1... No description available 0.08 OrthoFinder output from all 47 species
AT3G51230 No alias BEST Arabidopsis thaliana protein match is:... 0.11 OrthoFinder output from all 47 species
Adi_g016515 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aev_g37632 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g38808 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Als_g12208 No alias not classified & original description: none 0.13 OrthoFinder output from all 47 species
Als_g51690 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Aop_g08206 No alias not classified & original description: none 0.15 OrthoFinder output from all 47 species
Aop_g63946 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aspi01Gene00922.t1 Aspi01Gene00922 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene61927.t1 Aspi01Gene61927 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0247.g060098 No alias not classified & original description: CDS=147-1268 0.03 OrthoFinder output from all 47 species
Ceric.11G031400.1 Ceric.11G031400 not classified & original description: pacid=50595031... 0.09 OrthoFinder output from all 47 species
Ceric.1Z073500.1 Ceric.1Z073500 not classified & original description: pacid=50586247... 0.13 OrthoFinder output from all 47 species
Dcu_g03833 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
GSVIVT01018782001 No alias No description available 0.14 OrthoFinder output from all 47 species
Gb_14634 No alias no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
LOC_Os10g42660.1 LOC_Os10g42660 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
Len_g15733 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Lfl_g25652 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
MA_27772g0010 No alias no hits & (original description: none) 0.11 OrthoFinder output from all 47 species
MA_954115g0010 No alias no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
Mp3g15450.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g07779 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Msp_g38054 No alias not classified & original description: none 0.15 OrthoFinder output from all 47 species
Nbi_g07476 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g30180 No alias not classified & original description: none 0.14 OrthoFinder output from all 47 species
Ore_g32303 No alias not classified & original description: none 0.15 OrthoFinder output from all 47 species
Ore_g41832 No alias not classified & original description: none 0.12 OrthoFinder output from all 47 species
Sacu_v1.1_s0132.g022209 No alias not classified & original description: CDS=13-852 0.09 OrthoFinder output from all 47 species
Solyc02g062170.3.1 Solyc02g062170 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
Solyc02g083890.4.1 Solyc02g083890 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
Spa_g40625 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g41301 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Zm00001e002472_P001 Zm00001e002472 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
Zm00001e012997_P002 Zm00001e012997 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
CC GO:0000775 chromosome, centromeric region IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
BP GO:0007059 chromosome segregation IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0022414 reproductive process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032182 ubiquitin-like protein binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043130 ubiquitin binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0045132 meiotic chromosome segregation IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0098687 chromosomal region IEP HCCA
BP GO:0098813 nuclear chromosome segregation IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903046 meiotic cell cycle process IEP HCCA

No InterPro domains available for this sequence

No external refs found!