1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00029p00083110

AMTR_s00029p00083110 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00029.76

Description : Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.HCF136 protein


Gene families : OG_01_0006953 (Archaeplastida) Phylogenetic Tree(s): OG_01_0006953_tree ,
OG_02_0008269 (LandPlants) Phylogenetic Tree(s): OG_02_0008269_tree ,
OG_03_0010576 (SeedPlants) Phylogenetic Tree(s): OG_03_0010576_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00029p00083110
Cluster HCCA: Cluster_170

Target Alias Description ECC score Gene Family Method Actions
AT5G23120 HCF136 photosystem II stability/assembly factor, chloroplast (HCF136) 0.06 Archaeplastida
Cre06.g273700 No alias Photosynthesis.photophosphorylation.photosystem... 0.02 Archaeplastida
GSVIVT01012045001 No alias Photosynthesis.photophosphorylation.photosystem... 0.15 Archaeplastida
Gb_03750 No alias HCF136 protein involved in PS-II assembly 0.02 Archaeplastida
MA_10433328g0010 No alias HCF136 protein involved in PS-II assembly 0.08 Archaeplastida
Mp4g23900.1 No alias HCF136 protein involved in PS-II assembly 0.13 Archaeplastida
Pp3c15_7930V3.1 No alias photosystem II stability/assembly factor, chloroplast (HCF136) 0.06 Archaeplastida
Pp3c9_10350V3.1 No alias photosystem II stability/assembly factor, chloroplast (HCF136) 0.09 Archaeplastida
Smo227615 No alias Photosynthesis.photophosphorylation.photosystem... 0.03 Archaeplastida
Solyc02g014150.4.1 No alias HCF136 protein involved in PS-II assembly 0.11 Archaeplastida
Zm00001e030125_P002 No alias HCF136 protein involved in PS-II assembly 0.08 Archaeplastida
AT5G23120 HCF136 photosystem II stability/assembly factor, chloroplast (HCF136) 0.05 LandPlants
GSVIVT01012045001 No alias Photosynthesis.photophosphorylation.photosystem... 0.12 LandPlants
Gb_03750 No alias HCF136 protein involved in PS-II assembly 0.02 LandPlants
MA_10433328g0010 No alias HCF136 protein involved in PS-II assembly 0.05 LandPlants
Mp4g23900.1 No alias HCF136 protein involved in PS-II assembly 0.12 LandPlants
Pp3c15_7930V3.1 No alias photosystem II stability/assembly factor, chloroplast (HCF136) 0.06 LandPlants
Pp3c9_10350V3.1 No alias photosystem II stability/assembly factor, chloroplast (HCF136) 0.08 LandPlants
Smo227615 No alias Photosynthesis.photophosphorylation.photosystem... 0.03 LandPlants
Solyc02g014150.4.1 No alias HCF136 protein involved in PS-II assembly 0.1 LandPlants
Zm00001e030125_P002 No alias HCF136 protein involved in PS-II assembly 0.08 LandPlants
AT5G23120 HCF136 photosystem II stability/assembly factor, chloroplast (HCF136) 0.05 SeedPlants
GSVIVT01012045001 No alias Photosynthesis.photophosphorylation.photosystem... 0.12 SeedPlants
Gb_03750 No alias HCF136 protein involved in PS-II assembly 0.02 SeedPlants
MA_10433328g0010 No alias HCF136 protein involved in PS-II assembly 0.04 SeedPlants
Solyc02g014150.4.1 No alias HCF136 protein involved in PS-II assembly 0.1 SeedPlants
Zm00001e030125_P002 No alias HCF136 protein involved in PS-II assembly 0.08 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!