Sam_g13747


Description : not classified & original description: none


Gene families : OG0000796 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000796_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g13747

Target Alias Description ECC score Gene Family Method Actions
Adi_g004996 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g035298 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g073838 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g117929 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g07365 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g26639 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g31878 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g36129 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g71353 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g21469 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g33576 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g41734 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g08384 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g35560 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g25349 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g43555 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g65725 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g28843 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g25216 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g43974 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 21 68
IPR002885 Pentatricopeptide_repeat 98 124
No external refs found!