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  5. Sam_g13729

Sam_g13729


Description : substrate adaptor of CUL3-based E3 ubiquitin ligase complex & original description: none


Gene families : OG0001445 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001445_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g13729
Cluster HCCA: Cluster_168

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00262820 evm_27.TU.AmTr_v1... BTB/POZ domain-containing protein At1g63850... 0.03 OrthoFinder output from all 47 species
AT3G50780 No alias BEST Arabidopsis thaliana protein match is: BTB/POZ... 0.04 OrthoFinder output from all 47 species
Ala_g09948 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Als_g16155 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Als_g24857 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g06194 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Aspi01Gene34158.t1 Aspi01Gene34158 substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Azfi_s0447.g070683 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.05 OrthoFinder output from all 47 species
Cba_g78936 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Ceric.05G015600.1 Ceric.05G015600 substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.05 OrthoFinder output from all 47 species
Ceric.32G058100.1 Ceric.32G058100 substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.06 OrthoFinder output from all 47 species
Ceric.37G060600.1 Ceric.37G060600 substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.06 OrthoFinder output from all 47 species
Ehy_g07619 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
GSVIVT01025081001 No alias BTB/POZ domain-containing protein At5g60050... 0.02 OrthoFinder output from all 47 species
Gb_08652 No alias BTB/POZ domain-containing protein At1g63850... 0.01 OrthoFinder output from all 47 species
LOC_Os04g49060.1 LOC_Os04g49060 BTB/POZ domain-containing protein At1g63850... 0.04 OrthoFinder output from all 47 species
LOC_Os07g03150.3 LOC_Os07g03150 BTB/POZ domain-containing protein At3g50780... 0.04 OrthoFinder output from all 47 species
LOC_Os07g15600.1 LOC_Os07g15600 BTB/POZ domain-containing protein At2g13690... 0.04 OrthoFinder output from all 47 species
LOC_Os12g08720.1 LOC_Os12g08720 BTB/POZ domain-containing protein At2g13690... 0.02 OrthoFinder output from all 47 species
LOC_Os12g40480.1 LOC_Os12g40480 BTB/POZ domain-containing protein At3g50780... 0.04 OrthoFinder output from all 47 species
Len_g02880 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Lfl_g03334 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.05 OrthoFinder output from all 47 species
Msp_g48098 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Pnu_g03496 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Pnu_g07159 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Ppi_g30790 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0011.g005032 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0032.g010860 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.05 OrthoFinder output from all 47 species
Smo270367 No alias BTB/POZ domain-containing protein At1g63850... 0.02 OrthoFinder output from all 47 species
Spa_g04582 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Spa_g12525 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
Tin_g02070 No alias substrate adaptor of CUL3-based E3 ubiquiTin ligase... 0.02 OrthoFinder output from all 47 species
Tin_g02805 No alias substrate adaptor of CUL3-based E3 ubiquiTin ligase... 0.04 OrthoFinder output from all 47 species
Zm00001e005810_P001 Zm00001e005810 BTB/POZ domain-containing protein At3g50780... 0.05 OrthoFinder output from all 47 species
Zm00001e011544_P001 Zm00001e011544 BTB/POZ domain-containing protein At3g50780... 0.03 OrthoFinder output from all 47 species
Zm00001e011677_P001 Zm00001e011677 BTB/POZ domain-containing protein At2g13690... 0.02 OrthoFinder output from all 47 species
Zm00001e033246_P001 Zm00001e033246 BTB/POZ domain-containing protein At2g13690... 0.03 OrthoFinder output from all 47 species
Zm00001e041407_P001 Zm00001e041407 BTB/POZ domain-containing protein At1g63850... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
InterPro domains Description Start Stop
IPR000210 BTB/POZ_dom 289 405
No external refs found!