Sam_g13724


Description : component *(eL22) of large ribosomal-subunit (LSU) proteome & original description: none


Gene families : OG0000309 (OrthoFinder output from all 39 species) Phylogenetic Tree(s): OG0000309_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g13724

Target Alias Description ECC score Gene Family Method Actions
Aev_g03619 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 39 species
Aev_g26156 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 39 species
Ala_g11886 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 39 species
Ala_g18322 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 39 species
Als_g38432 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 39 species
Als_g38436 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 39 species
Aop_g10541 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 39 species
Aspi01Gene38161.t1 Aspi01Gene38161 component *(eL22) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 39 species
Azfi_s0003.g007793 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 39 species
Azfi_s0005.g009357 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 39 species
Cba_g49596 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 39 species
Ceric.08G045600.1 Ceric.08G045600 component *(eL22) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 39 species
Ceric.26G014800.1 Ceric.26G014800 component *(eL22) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 39 species
Dac_g04863 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 39 species
Dcu_g18517 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 39 species
Ehy_g03143 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 39 species
GSVIVT01031130001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 39 species
GSVIVT01031158001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 39 species
GSVIVT01035141001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.01 OrthoFinder output from all 39 species
Gb_08874 No alias component RPL22 of LSU proteome component 0.02 OrthoFinder output from all 39 species
Gb_36164 No alias component RPL22 of LSU proteome component 0.03 OrthoFinder output from all 39 species
Lfl_g23822 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 39 species
Lfl_g27449 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 39 species
MA_130453g0010 No alias component RPL22 of LSU proteome component 0.02 OrthoFinder output from all 39 species
Msp_g03306 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 39 species
Msp_g20028 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 39 species
Ore_g36770 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 39 species
Pir_g29051 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 39 species
Pir_g40025 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 39 species
Pnu_g12502 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 39 species
Pp3c11_630V3.1 Pp3c11_630 Ribosomal L22e protein family 0.03 OrthoFinder output from all 39 species
Pp3c11_680V3.1 Pp3c11_680 Ribosomal L22e protein family 0.02 OrthoFinder output from all 39 species
Pp3c1_120V3.1 Pp3c1_120 Ribosomal L22e protein family 0.03 OrthoFinder output from all 39 species
Pp3c2_28500V3.1 Pp3c2_28500 Ribosomal L22e protein family 0.04 OrthoFinder output from all 39 species
Pp3c2_28510V3.1 Pp3c2_28510 Ribosomal L22e protein family 0.04 OrthoFinder output from all 39 species
Pp3c7_27030V3.1 Pp3c7_27030 Ribosomal L22e protein family 0.01 OrthoFinder output from all 39 species
Sacu_v1.1_s0167.g024206 AGL26 component *(eL22) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 39 species
Sacu_v1.1_s0197.g025519 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 39 species
Spa_g05462 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 39 species
Spa_g14668 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 39 species
Spa_g22846 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 39 species
Tin_g11406 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 39 species
Tin_g17980 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 39 species
Tin_g36488 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 39 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
CC GO:0005759 mitochondrial matrix IEP HCCA
MF GO:0008097 5S rRNA binding IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
CC GO:0031974 membrane-enclosed lumen IEP HCCA
CC GO:0043233 organelle lumen IEP HCCA
CC GO:0070013 intracellular organelle lumen IEP HCCA
InterPro domains Description Start Stop
IPR002671 Ribosomal_L22e 18 127
No external refs found!