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  5. Sam_g13694

Sam_g13694


Description : EC_2.3 acyltransferase & original description: none


Gene families : OG0001304 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001304_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g13694
Cluster HCCA: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
Aop_g31438 LTA3 EC_2.3 acyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e006075_P001 LTA3, Zm00001e006075 component E2 of mitochondrial pyruvate dehydrogenase complex 0.03 OrthoFinder output from all 47 species
Zm00001e014469_P001 Zm00001e014469 component E2 of mitochondrial pyruvate dehydrogenase complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016746 acyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001078 2-oxoacid_DH_actylTfrase 398 628
IPR000089 Biotin_lipoyl 79 150
IPR000089 Biotin_lipoyl 204 276
IPR004167 PSBD 333 368
No external refs found!