Sam_g13618


Description : mRNA endoribonuclease *(TSN) & original description: none


Gene families : OG0004117 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004117_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g13618

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021357.71 TSN2, Tudor2, AtTudor2 RNA processing.messenger ribonucleoprotein particle... 0.02 OrthoFinder output from all 47 species
Ore_g20110 TSN2, Tudor2, AtTudor2 mRNA endoribonuclease *(TSN) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g32209 Tudor1, AtTudor1, TSN1 mRNA endoribonuclease *(TSN) & original description: none 0.02 OrthoFinder output from all 47 species
Smo165776 Tudor1, AtTudor1, TSN1 RNA processing.messenger ribonucleoprotein particle... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0004857 enzyme inhibitor activity IEP HCCA
MF GO:0004864 protein phosphatase inhibitor activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009966 regulation of signal transduction IEP HCCA
BP GO:0010646 regulation of cell communication IEP HCCA
BP GO:0010921 regulation of phosphatase activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0019208 phosphatase regulator activity IEP HCCA
MF GO:0019212 phosphatase inhibitor activity IEP HCCA
BP GO:0019220 regulation of phosphate metabolic process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0019888 protein phosphatase regulator activity IEP HCCA
BP GO:0023051 regulation of signaling IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
BP GO:0031399 regulation of protein modification process IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0035303 regulation of dephosphorylation IEP HCCA
BP GO:0035304 regulation of protein dephosphorylation IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0043666 regulation of phosphoprotein phosphatase activity IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0050790 regulation of catalytic activity IEP HCCA
BP GO:0051174 regulation of phosphorus metabolic process IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
BP GO:0051336 regulation of hydrolase activity IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR016071 Staphylococal_nuclease_OB-fold 35 144
IPR016071 Staphylococal_nuclease_OB-fold 266 357
IPR016071 Staphylococal_nuclease_OB-fold 623 721
IPR002999 Tudor 742 863
No external refs found!