Sam_g13547


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g13547
Cluster HCCA: Cluster_184

Target Alias Description ECC score Gene Family Method Actions
AT2G37320 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT3G57430 OTP84 Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G16470 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g003300 SLO1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g004496 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g005761 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g014778 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g021679 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g025630 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g034320 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g034429 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g035577 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g035637 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g036585 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g059925 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g068804 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g082055 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g087234 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g087265 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g088950 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g089076 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g098198 SLO1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g099350 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g101245 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g102645 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g06254 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g04279 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g15385 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g20449 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g61738 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g06037 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g08796 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16849 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g23679 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g31135 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g67727 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0032.g024956 No alias not classified & original description: CDS=109-3012 0.03 OrthoFinder output from all 47 species
Azfi_s0144.g051584 No alias not classified & original description: CDS=1-1965 0.02 OrthoFinder output from all 47 species
Cba_g04659 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g04699 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g06576 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g16716 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g20133 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g71700 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g77967 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.11G041000.1 Ceric.11G041000 not classified & original description: pacid=50594870... 0.02 OrthoFinder output from all 47 species
Ceric.17G076500.1 Ceric.17G076500 not classified & original description: pacid=50617139... 0.02 OrthoFinder output from all 47 species
Ceric.22G020200.1 Ceric.22G020200 not classified & original description: pacid=50615278... 0.02 OrthoFinder output from all 47 species
Dac_g04861 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g05692 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g09346 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g18775 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g19071 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g30287 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g35460 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g43765 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g08804 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g39614 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g47933 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g47943 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g08437 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g26440 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g28505 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g12271 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01025569001 No alias Pentatricopeptide repeat-containing protein At5g66500,... 0.02 OrthoFinder output from all 47 species
GSVIVT01030836001 No alias Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
Gb_04785 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
LOC_Os02g46980.1 LOC_Os02g46980 Pentatricopeptide repeat-containing protein At1g31920... 0.02 OrthoFinder output from all 47 species
LOC_Os03g44210.2 LOC_Os03g44210 RNA editing factor (SEL1/PDM1) 0.02 OrthoFinder output from all 47 species
LOC_Os04g41120.1 LOC_Os04g41120 Pentatricopeptide repeat-containing protein At4g38010... 0.02 OrthoFinder output from all 47 species
Len_g18514 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g33290 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_131g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
MA_653417g0010 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.04 OrthoFinder output from all 47 species
Msp_g27086 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g28021 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g05844 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g11470 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g32191 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g39306 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g02370 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g15249 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g26310 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g32012 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g30498 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53286 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0020.g008098 CRR22 not classified & original description: CDS=1-2784 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0023.g008877 No alias not classified & original description: CDS=1-2595 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0072.g016963 No alias not classified & original description: CDS=1-2211 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0100.g019669 OTP84 not classified & original description: CDS=1-1971 0.02 OrthoFinder output from all 47 species
Sam_g39339 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g110010.3.1 Solyc01g110010 Pentatricopeptide repeat-containing protein At1g74600,... 0.03 OrthoFinder output from all 47 species
Spa_g50449 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g17154 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g25647 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e001038_P001 CRR2, Zm00001e001038 Pentatricopeptide repeat-containing protein At1g08070,... 0.03 OrthoFinder output from all 47 species
Zm00001e010182_P001 Zm00001e010182 Pentatricopeptide repeat-containing protein At2g36980,... 0.02 OrthoFinder output from all 47 species
Zm00001e011923_P001 Zm00001e011923 Pentatricopeptide repeat-containing protein At4g21300... 0.02 OrthoFinder output from all 47 species
Zm00001e020567_P001 Zm00001e020567 RNA editing factor (MEF7) 0.03 OrthoFinder output from all 47 species
Zm00001e035419_P001 Zm00001e035419 Pentatricopeptide repeat-containing protein At1g25360... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 152 173
IPR002885 Pentatricopeptide_repeat 78 92
No external refs found!