Sam_g13530

Description : organellar chaperone *(Clp-p/Clp-m) & original description: none

Gene families : OG0000193 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000193_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sam_g13530

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00065p00179810	CLPB4, CLPB-M,...	External stimuli response.temperature.Hsp...	0.03	OrthoFinder output from all 47 species
Als_g38181	ATHSP101, HOT1, HSP101	cytosolic chaperone *(Hsp101) & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g33706	CLPB3, CLPB-P, APG6	organellar chaperone *(Clp-p/Clp-m) & original description: none	0.04	OrthoFinder output from all 47 species
Solyc06g011370.4.1	CLPB4, CLPB-M,...	Chaperone protein ClpB3, mitochondrial OS=Oryza sativa...	0.02	OrthoFinder output from all 47 species
Solyc06g011380.2.1	CLPB4, CLPB-M,...	Chaperone protein ClpB4, mitochondrial OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Solyc06g011400.2.1	CLPB4, CLPB-M,...	Chaperone protein ClpB4, mitochondrial OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Solyc06g082560.3.1	ATHSP101, HOT1,...	cytosolic chaperone (Hsp101)	0.03	OrthoFinder output from all 47 species
Zm00001e013843_P002	CLPB4, CLPB-M,...	organellar chaperone (Clp-p\|Clp-m)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATP hydrolysis activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR041546	ClpA/ClpB_AAA_lid	333	435
IPR003959	ATPase_AAA_core	195	325
IPR004176	Clp_R_dom	12	60
IPR004176	Clp_R_dom	85	136
IPR003959	ATPase_AAA_core	591	759
IPR019489	Clp_ATPase_C	766	843

External Links

No external refs found!