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  5. Sam_g13460

Sam_g13460


Description : EC_4.1 carbon-carbon lyase & original description: none


Gene families : OG0000934 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000934_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g13460

Target Alias Description ECC score Gene Family Method Actions
Adi_g108934 AUD1, UXS2, ATUXS2 EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g09942 UXS5 EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os05g29990.1 AUD1, UXS2,... UDP-D-glucuronic acid decarboxylase 0.03 OrthoFinder output from all 47 species
Len_g01759 AUD1, UXS2, ATUXS2 EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g06255 ATUXS3, UXS3 EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g066700.4.1 AUD1, UXS2,... UDP-D-glucuronic acid decarboxylase 0.02 OrthoFinder output from all 47 species
Solyc12g099480.2.1 AUD1, UXS2,... UDP-D-glucuronic acid decarboxylase 0.02 OrthoFinder output from all 47 species
Spa_g22501 AUD1, UXS2, ATUXS2 EC_4.1 carbon-carbon lyase & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g05896 UXS6 EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e026796_P001 AUD1, UXS2,... UDP-D-glucuronic acid decarboxylase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
InterPro domains Description Start Stop
IPR016040 NAD(P)-bd_dom 1 185
No external refs found!