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  5. Sam_g13357

Sam_g13357


Description : component *(bL21m) of large mitoribosomal-subunit proteome & original description: none


Gene families : OG0004500 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004500_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g13357

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00068p00183630 NFD1,... Protein biosynthesis.organelle translation... 0.03 OrthoFinder output from all 47 species
AT4G30930 NFD1 Ribosomal protein L21 0.05 OrthoFinder output from all 47 species
Azfi_s0001.g000513 NFD1 component *(bL21m) of large mitoribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Ceric.36G065300.1 NFD1, Ceric.36G065300 component *(bL21m) of large mitoribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Gb_38840 NFD1 component mtRPL21 of large ribosomal subunit proteome 0.06 OrthoFinder output from all 47 species
Len_g08614 NFD1 component *(bL21m) of large mitoribosomal-subunit... 0.08 OrthoFinder output from all 47 species
MA_10431350g0010 NFD1 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_747819g0010 NFD1 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Sam_g13356 No alias component *(bL21m) of large mitoribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Tin_g21386 NFD1 component *(bL21m) of large mitoribosomal-subunit... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005840 ribosome IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR028909 L21p-like 151 250
No external refs found!