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  5. Sam_g13265

Sam_g13265


Description : pre-60S ribosomal subunit assembly factor *(EBP2) & original description: none


Gene families : OG0004650 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004650_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g13265

Target Alias Description ECC score Gene Family Method Actions
AT3G22660 No alias rRNA processing protein-related 0.02 OrthoFinder output from all 47 species
Als_g62692 No alias pre-60S ribosomal subunit assembly factor *(EBP2) &... 0.03 OrthoFinder output from all 47 species
Aop_g09403 No alias pre-60S ribosomal subunit assembly factor *(EBP2) &... 0.06 OrthoFinder output from all 47 species
Azfi_s0705.g082696 No alias pre-60S ribosomal subunit assembly factor *(EBP2) &... 0.02 OrthoFinder output from all 47 species
Cre07.g351750 No alias Probable rRNA-processing protein EBP2 homolog... 0.02 OrthoFinder output from all 47 species
Dac_g09923 No alias pre-60S ribosomal subunit assembly factor *(EBP2) &... 0.03 OrthoFinder output from all 47 species
Lfl_g07271 No alias pre-60S ribosomal subunit assembly factor *(EBP2) &... 0.02 OrthoFinder output from all 47 species
Mp3g18310.1 No alias pre-60S ribosomal subunit assembly factor (EBP2) 0.02 OrthoFinder output from all 47 species
Solyc01g006090.3.1 Solyc01g006090 pre-60S ribosomal subunit assembly factor (EBP2) 0.02 OrthoFinder output from all 47 species
Solyc01g006170.4.1 Solyc01g006170 pre-60S ribosomal subunit assembly factor (EBP2) 0.03 OrthoFinder output from all 47 species
Zm00001e013941_P001 Zm00001e013941 pre-60S ribosomal subunit assembly factor (EBP2) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000491 small nucleolar ribonucleoprotein complex assembly IEP HCCA
BP GO:0000492 box C/D snoRNP assembly IEP HCCA
MF GO:0005319 lipid transporter activity IEP HCCA
MF GO:0005548 phospholipid transporter activity IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006869 lipid transport IEP HCCA
BP GO:0007009 plasma membrane organization IEP HCCA
BP GO:0015748 organophosphate ester transport IEP HCCA
BP GO:0015914 phospholipid transport IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0017121 plasma membrane phospholipid scrambling IEP HCCA
MF GO:0017128 phospholipid scramblase activity IEP HCCA
BP GO:0022618 ribonucleoprotein complex assembly IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034204 lipid translocation IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0045332 phospholipid translocation IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0061024 membrane organization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065008 regulation of biological quality IEP HCCA
BP GO:0071826 ribonucleoprotein complex subunit organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0097035 regulation of membrane lipid distribution IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0140303 intramembrane lipid transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR008610 Ebp2 55 333
No external refs found!