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  5. Sam_g13204

Sam_g13204


Description : not classified & original description: none


Gene families : OG0002040 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002040_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g13204
Cluster HCCA: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
Aop_g22161 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cre06.g279500 No alias Protein ORANGE, chloroplastic OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Dac_g10818 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g03483 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g56313 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g02899 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g39342 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g42810 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc09g010110.3.1 Solyc09g010110 Protein ORANGE-GREEN, chloroplastic OS=Cucumis melo... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
BP GO:0006066 alcohol metabolic process IEP HCCA
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0006772 thiamine metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
BP GO:0009228 thiamine biosynthetic process IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0034308 primary alcohol metabolic process IEP HCCA
BP GO:0034309 primary alcohol biosynthetic process IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042723 thiamine-containing compound metabolic process IEP HCCA
BP GO:0042724 thiamine-containing compound biosynthetic process IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046165 alcohol biosynthetic process IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0072527 pyrimidine-containing compound metabolic process IEP HCCA
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA
BP GO:1901617 organic hydroxy compound biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!