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  5. Lfl_g26678

Lfl_g26678


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g26678

Target Alias Description ECC score Gene Family Method Actions
Ala_g39532 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g05672 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19843 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g55197 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g39230 OTP84 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene39079.t1 Aspi01Gene39079 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene65182.t1 OTP86, Aspi01Gene65182 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene68665.t1 CRR22, Aspi01Gene68665 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g20476 MEF22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g20535 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g34429 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g45560 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.02G002600.1 EMB2758, Ceric.02G002600 not classified & original description: pacid=50585462... 0.09 OrthoFinder output from all 47 species
Ceric.19G069600.1 Ceric.19G069600 not classified & original description: pacid=50575437... 0.05 OrthoFinder output from all 47 species
Cre01.g025950 No alias Pentatricopeptide repeat-containing protein At5g02860... 0.01 OrthoFinder output from all 47 species
LOC_Os03g63560.1 LOC_Os03g63560 OTP70 plastidial RNA splicing factor 0.06 OrthoFinder output from all 47 species
Len_g18801 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g33724 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Len_g38488 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g41100 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0151.g023411 REME1 not classified & original description: CDS=1-1494 0.02 OrthoFinder output from all 47 species
Sam_g33990 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo11063 REME1 Pentatricopeptide repeat-containing protein At2g34400... 0.04 OrthoFinder output from all 47 species
Tin_g13479 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g14545 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g21292 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 198 222
IPR002885 Pentatricopeptide_repeat 2 19
IPR046848 E_motif 243 290
IPR002885 Pentatricopeptide_repeat 124 171
IPR002885 Pentatricopeptide_repeat 22 69
No external refs found!