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  5. Sam_g13021

Sam_g13021


Description : not classified & original description: none


Gene families : OG0000390 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000390_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g13021

Target Alias Description ECC score Gene Family Method Actions
Aev_g03308 No alias component *(MED26) of MEDIATOR transcription... 0.02 OrthoFinder output from all 47 species
Cba_g15866 No alias component *(MED26) of MEDIATOR transcription... 0.03 OrthoFinder output from all 47 species
LOC_Os03g24950.1 LOC_Os03g24950 component MED26 of MEDIATOR transcription co-activator complex 0.03 OrthoFinder output from all 47 species
Ppi_g17469 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc11g005450.3.1 Solyc11g005450 Probable mediator of RNA polymerase II transcription... 0.02 OrthoFinder output from all 47 species
Zm00001e035696_P001 Zm00001e035696 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
CC GO:0005787 signal peptidase complex IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006465 signal peptide processing IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0016485 protein processing IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
CC GO:1905368 peptidase complex IEP HCCA
InterPro domains Description Start Stop
IPR017923 TFIIS_N 125 172
No external refs found!