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  5. Sam_g13017

Sam_g13017


Description : subfamily ABCG transporter & original description: none


Gene families : OG0000071 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000071_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g13017

Target Alias Description ECC score Gene Family Method Actions
Ala_g02708 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g22545 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g27569 ABCG40, PDR12,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene20762.t1 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene20765.t1 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0198.g057417 PDR11, ATPDR11 subfamily ABCG transporter & original description: CDS=1-4590 0.03 OrthoFinder output from all 47 species
Dcu_g08318 PDR11, ATPDR11 subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g05962 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01016993001 ATPDR7, PDR7 Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
GSVIVT01016998001 PDR1, ATPDR1 Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
GSVIVT01035715001 PDR4, ATPDR4 Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
LOC_Os08g29570.1 ABCG40, PDR12,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
LOC_Os09g16449.1 ABCG40, PDR12,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Lfl_g28071 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
MA_178007g0010 PEN3, ABCG36,... RAB-GTPase-activating protein (RAB-GAP). subfamily ABCG... 0.03 OrthoFinder output from all 47 species
Nbi_g04474 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g34365 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g28590 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g09438 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c2_16850V3.1 PDR1, ATPDR1, Pp3c2_16850 pleiotropic drug resistance 7 0.01 OrthoFinder output from all 47 species
Smo417266 ABCG40, PDR12,... Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
Smo96729 ATPDR7, PDR7 Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
Solyc12g100180.2.1 ABCG40, PDR12,... subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Zm00001e003743_P001 PDR11, ATPDR11,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0140359 ABC-type transporter activity IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR013525 ABC_2_trans 101 313
No external refs found!