Description : not classified & original description: none
Gene families : OG0002789 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002789_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Sam_g12642 | |
Cluster | HCCA: Cluster_146 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Aspi01Gene50091.t1 | PHB1, ATPHB1,... | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os07g15880.1 | PHB2, ATPHB2,... | Prohibitin-2, mitochondrial OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
Len_g35119 | PHB1, ATPHB1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Nbi_g29084 | PHB1, ATPHB1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ore_g40562 | PHB1, ATPHB1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Pir_g12045 | PHB1, ATPHB1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pnu_g30025 | PHB1, ATPHB1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Solyc10g008140.3.1 | PHB1, ATPHB1,... | Prohibitin-2, mitochondrial OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000724 | double-strand break repair via homologous recombination | IEP | HCCA |
BP | GO:0000725 | recombinational repair | IEP | HCCA |
CC | GO:0005575 | cellular_component | IEP | HCCA |
CC | GO:0005667 | transcription regulator complex | IEP | HCCA |
CC | GO:0005672 | transcription factor TFIIA complex | IEP | HCCA |
BP | GO:0006281 | DNA repair | IEP | HCCA |
BP | GO:0006302 | double-strand break repair | IEP | HCCA |
BP | GO:0006310 | DNA recombination | IEP | HCCA |
BP | GO:0006352 | DNA-templated transcription initiation | IEP | HCCA |
BP | GO:0006367 | transcription initiation at RNA polymerase II promoter | IEP | HCCA |
BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | HCCA |
MF | GO:0008094 | ATP-dependent activity, acting on DNA | IEP | HCCA |
CC | GO:0008287 | protein serine/threonine phosphatase complex | IEP | HCCA |
CC | GO:0015934 | large ribosomal subunit | IEP | HCCA |
MF | GO:0019208 | phosphatase regulator activity | IEP | HCCA |
MF | GO:0019888 | protein phosphatase regulator activity | IEP | HCCA |
CC | GO:0030289 | protein phosphatase 4 complex | IEP | HCCA |
CC | GO:0032991 | protein-containing complex | IEP | HCCA |
BP | GO:0033554 | cellular response to stress | IEP | HCCA |
CC | GO:0044391 | ribosomal subunit | IEP | HCCA |
BP | GO:0051716 | cellular response to stimulus | IEP | HCCA |
BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
CC | GO:0090575 | RNA polymerase II transcription regulator complex | IEP | HCCA |
MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
MF | GO:0140658 | ATP-dependent chromatin remodeler activity | IEP | HCCA |
CC | GO:1903293 | phosphatase complex | IEP | HCCA |
CC | GO:1990904 | ribonucleoprotein complex | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001107 | Band_7 | 40 | 215 |
No external refs found! |