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  5. Sam_g12322

Sam_g12322


Description : not classified & original description: none


Gene families : OG0001026 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001026_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g12322

Target Alias Description ECC score Gene Family Method Actions
AT4G28770 No alias Tetraspanin family protein 0.04 OrthoFinder output from all 47 species
Azfi_s0144.g051608 TOM2A not classified & original description: CDS=40-957 0.02 OrthoFinder output from all 47 species
Gb_06588 No alias Tetraspanin-19 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Mp4g20500.1 TOM2A Tobamovirus multiplication protein 2A OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Pnu_g14073 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0043.g012928 No alias not classified & original description: CDS=25-411 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0088.g018542 TOM2A not classified & original description: CDS=285-1187 0.03 OrthoFinder output from all 47 species
Spa_g11019 TOM2A not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g24993 TOM2A not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e021709_P001 TOM2A, Zm00001e021709 Tobamovirus multiplication protein 2A OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR018499 Tetraspanin/Peripherin 14 142
No external refs found!